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Protein Overview: CE06413

General Information:
Name(s) found: CE06413 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00011709 G-protein coupled receptor status:Partially_confirmed UniProt:Q22405 protein_id:CAA98536.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 444 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: G-protein coupled receptor protein signaling pathway [IEALink to PubMed article]
    Molecular Function: rhodopsin-like receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYESTSFDQ SIATNDTDQE CAYSEPVYVK ERFWMVAIFG TAVCIINILE NTFLSFMLFK  60
   61 KKSYRSSHML YLALLAFFDV WMALAYIPLM SLNLFVDYYK SVVLLRAWFA YMLPMITVSH 120
  121 IAMTASSFLM VAASLERYVI TCHPTKNRWL SRNRMWIAAF AIFLGTTCKF SQLYEMEIEY 180
  181 LPQCMGTMRE YQLNLSALAR YEIYGYWRVH FRTIVTILIP FFSLAFINIR IVLVLSKNEF 240
  241 KFLHSTKLSD AKRKSAVRNA TRTMVFIVFT YLLSNVLNVI IIIWEYIDMD MLTQQFETFY 300
  301 MFAVDVVSLS TIIFGALRLP IYVICQANLR KEFFAQLKTM LSLNSYTGFL SSSTKNMTIE 360
  361 DMDIDRRTPD ISGDGTVLIV ESDQKKDSSA TCTVIRKNSL HRMNGGFSDM SEKRFKQFLN 420
  421 KYNSKLEKIL IENQFIRPSD NPLA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..384] PSI-BLAST 46.0 Rhodopsin
    2 View Details [385..444] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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