| Protein: | CE06413 |
| Organism: | Caenorhabditis elegans |
| Length: | 444 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06413.
| Description | E-value | Query Range |
Subject Range |
|
|
264.0 | [0..12] | [407..94] |
|
Region A: Residues: [1-384] |
1 11 21 31 41 51
| | | | | |
1 MDYESTSFDQ SIATNDTDQE CAYSEPVYVK ERFWMVAIFG TAVCIINILE NTFLSFMLFK 60
61 KKSYRSSHML YLALLAFFDV WMALAYIPLM SLNLFVDYYK SVVLLRAWFA YMLPMITVSH 120
121 IAMTASSFLM VAASLERYVI TCHPTKNRWL SRNRMWIAAF AIFLGTTCKF SQLYEMEIEY 180
181 LPQCMGTMRE YQLNLSALAR YEIYGYWRVH FRTIVTILIP FFSLAFINIR IVLVLSKNEF 240
241 KFLHSTKLSD AKRKSAVRNA TRTMVFIVFT YLLSNVLNVI IIIWEYIDMD MLTQQFETFY 300
301 MFAVDVVSLS TIIFGALRLP IYVICQANLR KEFFAQLKTM LSLNSYTGFL SSSTKNMTIE 360
361 DMDIDRRTPD ISGDGTVLIV ESDQ
|
| Detection Method: |  |
| Confidence: | 46.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [385-444] |
1 11 21 31 41 51
| | | | | |
1 KKDSSATCTV IRKNSLHRMN GGFSDMSEKR FKQFLNKYNS KLEKILIENQ FIRPSDNPLA 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
