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Protein Overview: CE06282

General Information:
Name(s) found: CE06282 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00011167 locus:chil-23 status:Confirmed UniProt:G5EBF8 protein_id:CAA93874.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 432 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNIKSEQKE SEELVLPNDR PQYEQRVTKQ PTSGKYIIIT ITLISIIIVG FGLGLCAQIY  60
   61 FQAESDVLPI CDKRIIGYYS GSGTSNITST QLSNLTHTVF AFVYMTPDGT LLFNNQIEKN 120
  121 RFLKLKEVVR NGNSKIKLMF SIGGKDNSKY FSSVIPSEER IQTFIESILE FLEAYDLDGV 180
  181 DLFWKWPEEE YRDAYFAFIN QLRKTFEAKK KYYILSIVIP PPTLDGWGKK RLNKIIESVD 240
  241 FINAYSTDYY TPLADNLSDD IAGPSAPIYF GAQGKSERNV HHTARNYSCL TKQASKFNIV 300
  301 IPFYATLWEN VYETVLDSKR GVYRHVAPFY GRTVGKTYLS RLAVKQEGFQ VESYSYDPAP 360
  361 RAAFSYNRTI GIYLTFETKE SIRAKIDYVK DRILGGVWIF SVDMDDETNS QLKAVSFDGF 420
  421 CTIGNGSKYE CV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..432] PSI-BLAST 89.30103 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • imaginal disc growth factor activity
    		•  3.9608908661313 bayes_pls_golite062009
  • growth factor activity
    		•  2.18932950777991 bayes_pls_golite062009
  • chitinase activity
    		•  1.96922204880842 bayes_pls_golite062009
  • receptor binding
    		•  1.89435893935497 bayes_pls_golite062009
  • binding
    		•  1.1885466730171 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.80333288291596 bayes_pls_golite062009
  • protein binding
    		•  0.690517649847952 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.141107738097631 bayes_pls_golite062009
  • pattern binding
    		•  0.113396113487931 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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