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Protein Overview: npp-1

General Information:
Name(s) found: npp-1 / CE06127 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00003787 locus:npp-1 status:Confirmed UniProt:Q21295 protein_id:CAA94281.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    establishment of mitotic spindle orientation [IGILink to PubMed article][IMPLink to PubMed article]
    regulation of cell fate specification [IMPLink to PubMed article]
    nuclear pore organization [IMPLink to PubMed article]
    oogenesis [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    regulation of asymmetric cell division [IMPLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    positive regulation of mitotic cell cycle, embryonic [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFARRGGITG IKAEDMPKNL PNLPDLPTTS ASQAPAPATQ NVSSPARRNL FGAPNDANRT  60
   61 LFTNSPASGT TSGTSGLFGT SSTTSGGLGG IGSTQQTAKS PVATRLAAFK SGTLGAGSLS 120
  121 GNTPTSFATP SALPGTNAPQ SSFLSPANNL NVAPAAYRPP YSTFGGSTPF GAASTGTAAG 180
  181 STLFGSSTAK PATGGFFGSS SGSTLGGLGA TQQQQQPVVQ QQQVIQQYHP FVKAVGDPKL 240
  241 FGNDNDGVVA KLNQVAAGLG VGKAPYKDGN QLLSFSMEGN LFERFVGIGY NRISERTDDE 300
  301 GFVTLVLRHP ITNLNTEERR DKILEIIKAI LGGGPNVEVR YAPGTSMRTL SDGCTEICII 360
  361 AKEGGFVAGA IKLAQILNDA PKMTQLESQL QVDKTRVLPK VGMSKAQRDR YLETVPDGID 420
  421 ERIWRQAIKE NPAPNKLLPV PVRGWEALRD RQKAQVGESK LFHEAINALG NRVEEANHEH 480
  481 ADAVVKMEII RNRHKTLSYR IVRVMLAQWI VSRYSRQIDT DEDVIEAKAD TLLAQMNRHN 540
  541 QVKFYVDKFY EILESKPDKL QESMWKMFDM TIEDEHYARR VLTKFVNICS GLYESTHQQI 600
  601 ESLEACRRAL EG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..365] PSI-BLAST 26.39794 No description for 1y0fB was found.
    2 View Details [366..612] PSI-BLAST 5.69897 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle