| Protein: | npp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 612 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for npp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
475.0 | [0..196] | [610..37] |
|
Region A: Residues: [1-365] |
1 11 21 31 41 51
| | | | | |
1 MFARRGGITG IKAEDMPKNL PNLPDLPTTS ASQAPAPATQ NVSSPARRNL FGAPNDANRT 60
61 LFTNSPASGT TSGTSGLFGT SSTTSGGLGG IGSTQQTAKS PVATRLAAFK SGTLGAGSLS 120
121 GNTPTSFATP SALPGTNAPQ SSFLSPANNL NVAPAAYRPP YSTFGGSTPF GAASTGTAAG 180
181 STLFGSSTAK PATGGFFGSS SGSTLGGLGA TQQQQQPVVQ QQQVIQQYHP FVKAVGDPKL 240
241 FGNDNDGVVA KLNQVAAGLG VGKAPYKDGN QLLSFSMEGN LFERFVGIGY NRISERTDDE 300
301 GFVTLVLRHP ITNLNTEERR DKILEIIKAI LGGGPNVEVR YAPGTSMRTL SDGCTEICII 360
361 AKEGG
|
| Detection Method: |  |
| Confidence: | 26.39794 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [366-612] |
1 11 21 31 41 51
| | | | | |
1 FVAGAIKLAQ ILNDAPKMTQ LESQLQVDKT RVLPKVGMSK AQRDRYLETV PDGIDERIWR 60
61 QAIKENPAPN KLLPVPVRGW EALRDRQKAQ VGESKLFHEA INALGNRVEE ANHEHADAVV 120
121 KMEIIRNRHK TLSYRIVRVM LAQWIVSRYS RQIDTDEDVI EAKADTLLAQ MNRHNQVKFY 180
181 VDKFYEILES KPDKLQESMW KMFDMTIEDE HYARRVLTKF VNICSGLYES THQQIESLEA 240
241 CRRALEG
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
