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Protein Overview: nas-18

General Information:
Name(s) found: nas-18 / CE06077 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00003537 locus:nas-18 Zinc metalloproteinase nas-18 status:Predicted UniProt:Q21179 protein_id:CAA98502.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 410 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    astacin activity [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCASCLHNAN AASFLMETFS RHRLNFICIG KMNIFYNVTS LDNKYSFHNP SAPVPHSSHA  60
   61 LSSRQAHFTS FRAPVAPPSR PRRSQLPSSA KLLYCFDSSF STEKRELMLF SMNFISSQTC 120
  121 VTFEENCSIP NRVQLVNGKG CSSYIGMNNI VQHLTFNDTC IDFGTAVHEL MHALGVIHTH 180
  181 SRLDRDNFLN INLTNVSKEM MHNYAIFNQS TNVVPYEYGS TMHYYANIST MFPKKSEYSA 240
  241 TLGIGRVTFY DMVILNTAYN CKCPNELLCG NGGYTNPSKC SECICPLGYG GVLCDRPSLI 300
  301 GKDTGLPLEV KDKIIEVKVV GIDNFFSYPT CLINGLEIKY MGDPRITNPI YCSADLINGK 360
  361 SFRSKLNPLL MNIHTLFGKN KVTFHYRYVT ERLSGYNKTT NGYDNYEYYD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 36.39794 STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES
    2 View Details [150..410] PSI-BLAST 13.522879 Mannose-binding protein associated serine protease 2, MASP2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.286076792172079 bayes_pls_golite062009
  • protein binding
    		•  0.14494900666454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle