| Protein: | nas-18 |
| Organism: | Caenorhabditis elegans |
| Length: | 410 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-18.
| Description | E-value | Query Range |
Subject Range |
|
|
284.0 | [0..8] | [407..240] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MCASCLHNAN AASFLMETFS RHRLNFICIG KMNIFYNVTS LDNKYSFHNP SAPVPHSSHA 60
61 LSSRQAHFTS FRAPVAPPSR PRRSQLPSSA KLLYCFDSSF STEKRELMLF SMNFISSQTC 120
121 VTFEENCSIP NRVQLVNGKG CSSYIGMNN
|
| Detection Method: |  |
| Confidence: | 36.39794 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [150-410] |
1 11 21 31 41 51
| | | | | |
1 IVQHLTFNDT CIDFGTAVHE LMHALGVIHT HSRLDRDNFL NINLTNVSKE MMHNYAIFNQ 60
61 STNVVPYEYG STMHYYANIS TMFPKKSEYS ATLGIGRVTF YDMVILNTAY NCKCPNELLC 120
121 GNGGYTNPSK CSECICPLGY GGVLCDRPSL IGKDTGLPLE VKDKIIEVKV VGIDNFFSYP 180
181 TCLINGLEIK YMGDPRITNP IYCSADLING KSFRSKLNPL LMNIHTLFGK NKVTFHYRYV 240
241 TERLSGYNKT TNGYDNYEYY D
|
| Detection Method: | |
| Confidence: | 13.522879 |
| Match: | 1nt0A |
| Description: | Mannose-binding protein associated serine protease 2, MASP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
