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Protein Overview: nas-16

General Information:
Name(s) found: nas-16 / CE06075 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00003535 locus:nas-16 Zinc metalloproteinase nas-16 status:Predicted UniProt:Q21180 protein_id:CAA98503.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 451 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    astacin activity [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNLFKFSLN CIKYRSENLE KSKMFYQYFY FHLTLSIVLI YGSDIGKDAN EHMSSVPKKI  60
   61 IIEGTRQKRQ VVTKLFSPQW SNAKVFYCNA DSFSKLQLKK LKLKKNSDTV KRKLMKFAMN 120
  121 FISSQTCVTF EENCTISTRI KFVDSTFCAS YVGMINSVQE IYFPDWCMRF GSAVHELMHA 180
  181 LGVLHTHARF DRDNFLNVNL NKDDEDDSNF EIVSPPFSIN VVPYEYGSTL HYTADVSGTN 240
  241 SLLPKQMEYY RTLGNRRVTF YDMLTINTAY NCKCPSELLC ANGGYTNPSN CLECICPLGY 300
  301 GGVLCDRVVA CSVQLSADSY WKGSWISVGS SVLRDTTDPV KAFISINAPK DKIIEVKIVK 360
  361 IENFSCDSGC NNNGVEIKYM GDPRITNPII CCENQVDPSN KGYKAKLNPL LINIYTFLGK 420
  421 NKVTFHYRYV NERLSSYNKT TNGYDNYEYY A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] PSI-BLAST 33.69897 STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES
    2 View Details [193..451] PSI-BLAST 23.69897 Mannose-binding protein associated serine protease 2, MASP2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.361128926739778 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29183147920977 bayes_pls_golite062009
  • peptidase activity
    		•  0.23695590197447 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.0341081586881899 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle