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Protein Overview: col-126

General Information:
Name(s) found: col-126 / CE05938 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00000700 locus:col-126 collagen status:Predicted UniProt:G5EFU7 protein_id:CAB00858.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: phosphate transport [IEALink to PubMed article]
    Molecular Function: structural constituent of cuticle [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIKRKEIQE KRYHFDMEKI LVTISTGAAS IAVLAVLFTV PSLYNTINEV HDQVLDGVSV  60
   61 FRVETDSAWT EMMDIQVTVT PPTKPRVNPF NSVFRQKRQT FSGLPAWCQC EPTKPTCPPG 120
  121 PPGPPGQPGA PGVPGAPGPR GGDSTVTYAP INCPQVSFDC IKCPAGPAGP AGSSGPAGPA 180
  181 GPSGQPGTPG QRGNDGFPGA PGAPGDNGQP GFPGQDGAPG QPGADGQRGA GTPGAPGAPG 240
  241 NAGPAGPSGQ DGFPGQDGAP GSAGPAGQDG FPGNNGSDGQ PGAPGGPGLP GNDAAYCACP 300
  301 PRSAVFLSRH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..310] PSI-BLAST 27.09691 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle