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Protein Overview: CE05789

General Information:
Name(s) found: CE05789 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00009333 status:Partially_confirmed UniProt:Q19959 protein_id:CAA98450.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 399 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: G-protein coupled receptor protein signaling pathway [IEALink to PubMed article]
    Molecular Function: rhodopsin-like receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIGNQTALE SQAENISSYD STIMQPDYTN PCSAADDYLI TERFWLCVVA GVTVSIISIV  60
   61 FNTFIFFVFV TNKQHRRSPN LYLLLLSLFD VFIAFAYIAV MSVRILVNFT SSVFLKSIWV 120
  121 HYMIPMLTVS HIGITSSTFL ICFASIERYC ITVNHFFVPY LQRFRPLLAF TAIMCGVVSK 180
  181 GTIVKEVDIS YNPECYGELN YWTVVPSQLL FDFPKINEYW RFYFRNIFTI LAPFFILLLV 240
  241 NCLLLFQLRE HVLKSKCADH DKQNVKEKKA RIRATTKSVV IIVCTYLMSN LLSVIITIWE 300
  301 YIDKESIFSE DWIAFYVLSV DVISLLTIVA SSARLPIYAY FQPLLRKEMG QCLGDWWCCC 360
  361 FSENDKKMSL LDDLQLPKTQ LISTPDGETP SISSKIEFV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..399] PSI-BLAST 43.39794 Rhodopsin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  1.40205587023688 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.40205587023688 bayes_pls_golite062009
  • receptor activity
    		•  1.39249706683393 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  1.04604785247703 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  1.016863453778 bayes_pls_golite062009
  • binding
    		•  0.101461761820711 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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