| Protein: | CE05789 |
| Organism: | Caenorhabditis elegans |
| Length: | 399 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05789.
| Description | E-value | Query Range |
Subject Range |
|
|
275.0 | [0..20] | [355..362] |
|
Region A: Residues: [1-399] |
1 11 21 31 41 51
| | | | | |
1 MDIGNQTALE SQAENISSYD STIMQPDYTN PCSAADDYLI TERFWLCVVA GVTVSIISIV 60
61 FNTFIFFVFV TNKQHRRSPN LYLLLLSLFD VFIAFAYIAV MSVRILVNFT SSVFLKSIWV 120
121 HYMIPMLTVS HIGITSSTFL ICFASIERYC ITVNHFFVPY LQRFRPLLAF TAIMCGVVSK 180
181 GTIVKEVDIS YNPECYGELN YWTVVPSQLL FDFPKINEYW RFYFRNIFTI LAPFFILLLV 240
241 NCLLLFQLRE HVLKSKCADH DKQNVKEKKA RIRATTKSVV IIVCTYLMSN LLSVIITIWE 300
301 YIDKESIFSE DWIAFYVLSV DVISLLTIVA SSARLPIYAY FQPLLRKEMG QCLGDWWCCC 360
361 FSENDKKMSL LDDLQLPKTQ LISTPDGETP SISSKIEFV
|
| Detection Method: |  |
| Confidence: | 43.39794 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 1.40205587023688 | bayes_pls_golite062009 |
| molecular transducer activity | 1.40205587023688 | bayes_pls_golite062009 |
| receptor activity | 1.39249706683393 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.04604785247703 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 1.016863453778 | bayes_pls_golite062009 |
| binding | 0.101461761820711 | bayes_pls_golite062009 |
