Protein Overview: abcf-1

General Information:
Name(s) found:	abcf-1 / CE05663 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00006512 locus:abcf-1 status:Confirmed UniProt:Q19554 protein_id:CAA99835.1 [WormBase] pir\|\|T21090 hypothetical protein F18E2.2 - Caenorhabditis elegans [NCBI NR] gi\|3876095\|emb\|CAA99835.1\| C. elegans protein F18E2.2, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|17559834\|ref\|NP_506192.1\| ABC transporter, class F family member (abcf-1) [Caenorhabditis elegans] [NCBI NR] [wormpep67.fasta] CE05663 WBGene00006512 locus:tag-167 ABC transpoter status:Confirmed TR:Q19554 protein_id:CAA99835.1 [wormpep150.fasta] 05663 WBGene00006512 locus:tag-167 ABC transpoter status:Confirmed TR:Q19554 protein_id:CAA99835.1 [wormpep130-phg-ecoli-orf-rand.fasta] ATP-binding cassette sub-family F member like (69.2 kD) (5N242) [Caenorhabditis elegans]gi\|3876095\|emb\|CAA99835.1\| Hypothetical protein F18E2.2 [Caenorhabditis elegans]gi\|7499359\|pir\|\|T21090 hypothetical protein F18E2.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas] ABC transpoter status:Partially_confirmed TR:Q19554 protein_id:CAA99835.1 [wormpep115.fasta.reversed] CE05663 ABC transpoter status:Partially_confirmed TR:Q19554 protein_id:CAA99835.1 [wormpep80.hongbin] CE05663 WBGene00006512 locus:abcf-1 ABC transpoter status:Confirmed UniProt:Q19554_CAEEL protein_id:CAA99835.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE05663 WBGene00006512 locus:abcf-1 ABC transpoter status:Confirmed UniProt:Q19554_CAEEL protein_id:CAA99835.1\| [wormORF-contam.fasta] Temporarily Assigned Gene name family member (tag-167) [Caenorhabditis elegans] [nr-271106-contam.fasta] Hypothetical protein F18E2.2 [Caenorhabditis elegans] [nr-271106-contam.fasta] CE05663 WBGene00006512 locus:abcf-1 ABC transpoter status:Confirmed TR:Q19554 protein_id:CAA99835.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta] CE05663 WBGene00006512 locus:abcf-1 ABC transpoter status:Confirmed UniProt:Q19554 protein_id:CAA99835.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE05663 WBGene00006512 locus:abcf-1 status:Confirmed UniProt:Q19554 protein_id:CAA99835.1 [wormpep246-ecoli-contam.fasta] ABC transporter, class F OS=Caenorhabditis elegans GN=abcf-1 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	622 amino acids
Gene Ontology:
Cellular Component:	Gram-negative-bacterium-type cell wall [IEA] membrane [IEA] integral to membrane [IEA] outer membrane-bounded periplasmic space [IEA]
Biological Process:	hermaphrodite genitalia development [IMP] embryonic development ending in birth or egg hatching [IMP] protein transport [IEA] transport [IEA] nodulation [IEA] reproduction [IMP] cell division [IEA] cobalt ion transport [IEA] D-methionine transport [IEA] phosphate transport [IEA] nitrate transport [IEA] phosphonate transport [IEA] polyamine transport [IEA] cytochrome complex assembly [IEA] molybdate ion transport [IEA]
Molecular Function:	ATPase activity [IEA] phosphate transmembrane transporter activity [IEA] ATPase activity, coupled to transmembrane movement of substances [IEA] nitrate transmembrane transporter activity [IEA] molybdate ion transmembrane transporter activity [IEA] cysteine-type peptidase activity [IEA] transporter activity [IEA] nucleotide binding [IEA] D-methionine transmembrane transporter activity [IEA] ATP binding [IEA] inorganic phosphate transmembrane transporter activity [IEA] nucleoside-triphosphatase activity [IEA] polyamine-transporting ATPase activity [IEA] phosphonate transmembrane-transporting ATPase activity [IEA] toxin transporter activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAGKKISR KEAKKAKAKE NYDKTILSMG GVVENLPEVE GDQEEHGGIG SGAELGAHFT  60
   61 VSQLSKTGTQ LAQMENSMDI KIENFDISAQ GKLLFDKASL TIVYGRRYGL VGPNGMGKTT 120
  121 LLKHIGARKL AIPSHIDLLY CEQEIQVDST SAIDTVVKSD KKRLALLEEE AKLMSEIEEG 180
  181 KTEAAERMKE VADELRDIGA DSAEPRARRI LAGLGFSKEM QEKPCTDFSG GWRMRISLAR 240
  241 ALFLEPTLLM LDEPTNHLDL NAVIWLDNYL QTWKKTLLIV SHDQGFLDSV CTDIIHLDNQ 300
  301 KLHTYRGNYT LFKKQYAQDM QVHEKNFDQQ QKQLKAMKKE GKSAKQAEEQ VKQQMANKAK 360
  361 KGGKKNAGKV NDDDDAGAPE LLQRRKEYSV KFQFPETTKL NPPVLGLHDV NFGYGKDVLF 420
  421 KKLNFGVDMD SRIAIVGPNG VGKSTLLKLL IGKIDPNDGE LRKHRTLRIG WFDQHANEAL 480
  481 NGEQTPVEFL CTKFNIDYQE ARKQLGTTGL AAHAHTVKIK DLSGGQKSRV ALCNLALGGP 540
  541 DIIILDEPTN NLDIESIDAL AEAIRDFNGG VVMVTHDERL VVRTDCNLWV VENQGIDEID 600
  601 GDFEDYKKEV LDALGEALVS KK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..77]	deduced	N/A	No confident structure predictions are available.
2	View Details	[78..384]	PSI-BLAST	34.69897	No description for 2iw3A was found.
3	View Details	[385..622]	FFAS03	5.18	No description for 2ihyA was found.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: abcf-1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: