YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE05393

General Information:
Name(s) found: CE05393 [WormBase]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • WBGene00008033 locus:spin-2 status:Partially_confirmed UniProt:Q18545 protein_id:CAA94337.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: drug transport [IEALink to PubMed article]
    immune response [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    transport [IEALink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: tumor necrosis factor receptor binding [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]
    drug transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNSQQDYIS VTALFVVNLL NYVDRYTVAG VLTQVQTYYN ISDSLGGLIQ TVFLISFMVF  60
   61 SPVCGYLGDR FNRKWIMIIG VGIWLGAVLG SSFVPANHFW LFLVLRSFVG IGEASYSNVA 120
  121 PSLISDMFNG QKRSTVFMIF YFAIPVGSGL GFIVGSNVAT LTGHWQWGIR VSAIAGLIVM 180
  181 IALVLFTYEP ERGAADKAMG ESKDVVVTTN TTYLEDLVIL LKTPTLVACT WGYTALVFVS 240
  241 GTLSWWEPTV IQHLTAWHQG LNDTKDLAST DKDRVALYFG AITTAGGLIG VIFGSMLSKW 300
  301 LVAGWGPFRR LQTDRAQPLV AGGGALLAAP FLLIGMIFGD KSLVLLYIMI FFGITFMCFN 360
  361 WGLNIDMLTT VIHPNRRSTA FSYFVLVSHL FGDASGPYLI GLISDAIRHG STYPKDQYHS 420
  421 LVSATYCCVA LLLLSAGLYF VSSLTLVSDR KKFRAEMGLD DLQSKPIRTS TDSLERIGIN 480
  481 DDVASSRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..488] PSI-BLAST 29.522879 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • binding
    		•  1.05701989682533 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle