| Protein: | CE05393 |
| Organism: | Caenorhabditis elegans |
| Length: | 488 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05393.
| Description | E-value | Query Range |
Subject Range |
|
|
245.0 | [0..7] | [414..179] |
|
Region A: Residues: [1-488] |
1 11 21 31 41 51
| | | | | |
1 MVNSQQDYIS VTALFVVNLL NYVDRYTVAG VLTQVQTYYN ISDSLGGLIQ TVFLISFMVF 60
61 SPVCGYLGDR FNRKWIMIIG VGIWLGAVLG SSFVPANHFW LFLVLRSFVG IGEASYSNVA 120
121 PSLISDMFNG QKRSTVFMIF YFAIPVGSGL GFIVGSNVAT LTGHWQWGIR VSAIAGLIVM 180
181 IALVLFTYEP ERGAADKAMG ESKDVVVTTN TTYLEDLVIL LKTPTLVACT WGYTALVFVS 240
241 GTLSWWEPTV IQHLTAWHQG LNDTKDLAST DKDRVALYFG AITTAGGLIG VIFGSMLSKW 300
301 LVAGWGPFRR LQTDRAQPLV AGGGALLAAP FLLIGMIFGD KSLVLLYIMI FFGITFMCFN 360
361 WGLNIDMLTT VIHPNRRSTA FSYFVLVSHL FGDASGPYLI GLISDAIRHG STYPKDQYHS 420
421 LVSATYCCVA LLLLSAGLYF VSSLTLVSDR KKFRAEMGLD DLQSKPIRTS TDSLERIGIN 480
481 DDVASSRL
|
| Detection Method: |  |
| Confidence: | 29.522879 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| binding | 1.05701989682533 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
