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Protein Overview: col-151

General Information:
Name(s) found: col-151 / CE05136 [WormBase]
Description(s) found:
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  • WBGene00000724 locus:col-151 status:Partially_confirmed UniProt:Q17402 protein_id:CAA94869.1 [WormBase]
  • pir||T18594 hypothetical protein AC3.6 - Caenorhabditis elegans [NCBI NR]
  • gi|3873648|emb|CAA94869.1| C. elegans protein AC3.6, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17557174|ref|NP_505670.1| COLlagen family member (col-151) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE05136 WBGene00000724 locus:col-151 collagen status:Partially_confirmed TR:Q17402 protein_id:CAA94869.1 [wormpep150.fasta]
  • 05136 WBGene00000724 locus:col-151 collagen status:Partially_confirmed TR:Q17402 protein_id:CAA94869.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • COLlagen structural gene (col-151) [Caenorhabditis elegans]gi|3873648|emb|CAA94869.1| Hypothetical protein AC3.6 [Caenorhabditis elegans]gi|7494660|pir||T18594 hypothetical protein AC3.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:col-151 collagen status:Partially_confirmed TR:Q17402 protein_id:CAA94869.1 [wormpep115.fasta.reversed]
  • CE05136 collagen status:Partially_confirmed TR:Q17402 protein_id:CAA94869.1 [wormpep80.hongbin]
  • CE05136 WBGene00000724 locus:col-151 collagen status:Partially_confirmed UniProt:Q17402_CAEEL protein_id:CAA94869.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE05136 WBGene00000724 locus:col-151 collagen status:Partially_confirmed UniProt:Q17402_CAEEL protein_id:CAA94869.1| [wormORF-contam.fasta]
  • Hypothetical protein AC3.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • AC3.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE05136 WBGene00000724 locus:col-151 collagen status:Partially_confirmed UniProt:Q17402 protein_id:CAA94869.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE05136 WBGene00000724 locus:col-151 status:Partially_confirmed UniProt:Q17402 protein_id:CAA94869.1 [wormpep246-ecoli-contam.fasta]
  • COLlagen OS=Caenorhabditis elegans GN=col-151 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 325 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: phosphate transport [IEALink to PubMed article]
    Molecular Function: structural constituent of cuticle [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHTNFLFAT ILLIVFAVLT ILASIFSVFN EIENFEITSL EDLKTFEKYS DDAWNLITES  60
   61 IREKRAVYRI KLPPRHGYGQ PRYVTIPPTN SYAVPEVGGS MPLICPEGPP GRPGHPGHPG 120
  121 EDGSAGQPGS PGGVGVLLSM KLPYNGCIQC PMGPQGQPGR PGLMGHPGDV GVTGMDGIPG 180
  181 GRGLPGYPGM PGDNGSGGAN GHDGATGQPG RSGTRSYGSP GPAGSPGRVG RGGPPGPDGG 240
  241 YPMSGEPGSS GPQGKAGQPG GPGVDGHPGR PGGSGRPGPD SGYCKCPQRG KTDEFSNYNT 300
  301 KASTPTEKPE ASSDWRRVRK VKVSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..325] PSI-BLAST 35.09691 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle