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Protein Overview: pos-1

General Information:
Name(s) found: pos-1 / CE04629 [WormBase]
Description(s) found:
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  • WBGene00004078 locus:pos-1 status:Confirmed UniProt:G5EF15 protein_id:CCD70802.1 [WormBase]
  • pir||T37246 probable transcription factor pos-1 - Caenorhabditis elegans [NCBI NR]
  • gi|3767590|dbj|BAA33854.1| cytoplasmic zinc-finger protein [Caenorhabditis elegans] [NCBI NR]
  • gi|17562800|ref|NP_505172.1| POsterior Segregation family member (pos-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|1086811|gb|AAB37036.1| Posterior segregation protein 1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE04629 WBGene00004078 locus:pos-1 zinc-finger protein status:Confirmed TR:Q20667 protein_id:AAB37036.1 [wormpep150.fasta]
  • 04629 WBGene00004078 locus:pos-1 zinc-finger protein status:Confirmed TR:Q20667 protein_id:AAB37036.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • cytoplasmic zinc-finger protein essential for germline specification., POsterior Segregation POS-1 (29.8 kD) (pos-1) [Caenorhabditis elegans]gi|1086811|gb|AAB37036.1| Posterior segregation protein 1 [Caenorhabditis elegans]gi|7511589|pir||T37246 probabl [nrdb_11152004_Chlamydomonas]
  • locus:pos-1 zinc-finger protein status:Confirmed TR:Q20667 protein_id:AAB37036.1 [wormpep115.fasta.reversed]
  • CE04629 locus:pos-1 zinc-finger protein status:Confirmed [wormpep80.hongbin]
  • CE04629 WBGene00004078 locus:pos-1 zinc-finger protein status:Confirmed UniProt:Q20667_CAEEL protein_id:AAB37036.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04629 WBGene00004078 locus:pos-1 zinc-finger protein status:Confirmed UniProt:Q20667_CAEEL protein_id:AAB37036.1| [wormORF-contam.fasta]
  • cytoplasmic zinc-finger protein [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Posterior segregation protein 1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • POsterior Segregation family member (pos-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE04629 WBGene00004078 locus:pos-1 zinc-finger protein status:Confirmed UniProt:Q20667 protein_id:AAB37036.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04629 WBGene00004078 locus:pos-1 zinc-finger protein status:Confirmed UniProt:G5EF15 protein_id:CCD70802.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE04629 WBGene00004078 locus:pos-1 status:Confirmed UniProt:G5EF15 protein_id:CCD70802.1 [wormpep246-ecoli-contam.fasta]
  • Cytoplasmic zinc-finger protein OS=Caenorhabditis elegans GN=pos-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 264 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    P granule [IDALink to PubMed article]
    Biological Process: embryonic development [IMPLink to PubMed article]
    embryonic pattern specification [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    cell fate specification [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    transcription regulator activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNDFLSGE AIMVFKKEIL DSHSDFTRSL SHQSASPEAY DQENVFSQDF QPFMKQDKET  60
   61 QNSASQPTSE QSLANRDPCT VPDDLREEMM RQRRKEDAFK TALCDAYKRS QACSYGDQCR 120
  121 FAHGVHELRL PMNPRGRNHP KYKTVLCDKF SMTGNCKYGT RCQFIHKIVD GNAAKLASGA 180
  181 HANTSSKSPA RNAAAHNHSL FVPQGSTDRS MDLNQSLPIR QSDLVRAFAR ATRLDVSGYN 240
  241 STAQLAQYFE SQFQRIQQLS SHHH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] deduced N/A No confident structure predictions are available.
    2 View Details [100..173] PSI-BLAST 18.0 Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d
    3 View Details [174..264] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle