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Protein Overview: CE03547

General Information:
Name(s) found: CE03547 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00011162 chitinase status:Predicted UniProt:Q21862 protein_id:CAA93866.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 444 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVIAFSCRK DSGQEPSQSR WRPYLKYIII VAVFLIVVAI ATVTIVLIAN RVDGSANTST  60
   61 VPNVSSTVAK STITTRAPPV CNKRIIGYYF ATQTSVITRD QVSKLTHAVF AFVNMTSDGH 120
  121 LQIDGDLAKN RFTNLIEIAK QQTPQVKVMI SIGGNDNSNN FKPGLSSPDR KKLFINSTVS 180
  181 FLQTYDIDGV DLYWKWPGKT SKDIYSQFIN DLRYSLQRQK RNYIMSIVLP PPDMGANYEA 240
  241 GIDIENIFDN VDFLNIFTMG YFGPWQNDAG MITGAASQLF NGVNGVPGRK TYNIHHSTER 300
  301 YVCKTGQSDK YNIAIPFYTM LWKHVKGPVN PPNIEIYRNA TFQGGVVGET SMSRKLVQEE 360
  361 GYDFSNPTYN PEIRAAFKYN ATTETFLTFE TNDTIAAKID YVKDRILGGV WIWAVDMDDD 420
  421 SNNLLNLVKF TGYCTVGNLT LYNC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] deduced N/A No confident structure predictions are available.
    2 View Details [80..444] PSI-BLAST 84.0 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • chitinase activity
    		•  6.40555694403866 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  1.91170236789651 bayes_pls_golite062009
  • amylase activity
    		•  1.38959979746158 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  1.34796838721403 bayes_pls_golite062009
  • chitin binding
    		•  1.29046765706168 bayes_pls_golite062009
  • growth factor activity
    		•  0.803631304661827 bayes_pls_golite062009
  • receptor binding
    		•  0.607116029438976 bayes_pls_golite062009
  • catalytic activity
    		•  0.534516847146079 bayes_pls_golite062009
  • glucosidase activity
    		•  0.528679164808812 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.4998423581103 bayes_pls_golite062009
  • binding
    		•  0.459434776404249 bayes_pls_golite062009
  • hydrolase activity
    		•  0.391743039933741 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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