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Protein Overview: CE03544

General Information:
Name(s) found: CE03544 [WormBase]
Description(s) found:
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  • WBGene00011159 locus:chil-17 status:Partially_confirmed UniProt:Q21859 protein_id:CAA93863.1 [WormBase]
  • pir||T24074 hypothetical protein R09D1.3 - Caenorhabditis elegans [NCBI NR]
  • gi|3878973|emb|CAA93863.1| C. elegans protein R09D1.3, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17535569|ref|NP_496019.1| hypothetical protein R09D1.3 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE03544 WBGene00011159 chitinase status:Partially_confirmed TR:Q21859 protein_id:CAA93863.1 [wormpep150.fasta]
  • 03544 WBGene00011159 chitinase status:Partially_confirmed TR:Q21859 protein_id:CAA93863.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • glycoside hydrolase, family 18 (2J730) [Caenorhabditis elegans]gi|3878973|emb|CAA93863.1| Hypothetical protein R09D1.3 [Caenorhabditis elegans]gi|7506510|pir||T24074 hypothetical protein R09D1.3 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • chitinase status:Partially_confirmed TR:Q21859 protein_id:CAA93863.1 [wormpep115.fasta.reversed]
  • CE03544 chitinase status:Predicted TR:Q21859 protein_id:CAA93863.1 [wormpep80.hongbin]
  • CE03544 WBGene00011159 chitinase status:Partially_confirmed UniProt:Q21859_CAEEL protein_id:CAA93863.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE03544 WBGene00011159 chitinase status:Partially_confirmed UniProt:Q21859_CAEEL protein_id:CAA93863.1| [wormORF-contam.fasta]
  • Hypothetical protein R09D1.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • R09D1.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE03544 WBGene00011159 chitinase status:Partially_confirmed UniProt:Q21859 protein_id:CAA93863.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE03544 WBGene00011159 locus:chil-17 status:Partially_confirmed UniProt:Q21859 protein_id:CAA93863.1 [wormpep246-ecoli-contam.fasta]
  • CHItinase-Like OS=Caenorhabditis elegans GN=chil-17 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 435 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNYSLLDK FHSYYERRAH NNNELTTKLV KRVVIISGIF LFCGIVSYAL TTFVFHFYKE  60
   61 DKFSKNEVGL DPICKRRIVG YYSEYDSTDI SKNQLAKLTH AVFAFVDIKY DGTLQFKNLI 120
  121 TEQKFFSLKS KARSLHSNLK LMFSIGGDEN SFDFSSALAN TQMKSTLITS IIAFIHSHMI 180
  181 DGVDLHWKWP TSRDKSNYAT LIREIREKVD ELDAKIIISI TIPPVGVSDW ESGFDLDAIQ 240
  241 KHVDFINVHS MDYAKPLPNQ WGTPTGPSAS MNFNIGLRQH YNVDWTMKHY TCELKKPSMI 300
  301 NLVIPFYVRM WKNVQKAIDN RTEVFRNVEL KDNEVEGRSQ LSRYTVEHED MELSPESWDN 360
  361 ATQTPYVLDL KTRTFFTYEN EKSIKVKLDY VNKMDLGGVW IWSVDMDDRL NTLLSFVFPN 420
  421 ELCSSYSENG IKYSC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..435] PSI-BLAST 91.69897 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • growth factor activity
    		•  0.34357571678721 bayes_pls_golite062009
  • receptor binding
    		•  0.21634641574378 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle