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Protein Overview: CE03271

General Information:
Name(s) found: CE03271 [WormBase]
Description(s) found:
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  • WBGene00009186 locus:trcs-1 status:Confirmed UniProt:Q19839 protein_id:CAA92464.1 [WormBase]
  • pir||T21450 hypothetical protein F27C8.6 - Caenorhabditis elegans [NCBI NR]
  • gi|3876350|emb|CAA92464.1| C. elegans protein F27C8.6, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17540028|ref|NP_501702.1| hypothetical protein F27C8.6 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE03271 WBGene00009186 esterase status:Confirmed TR:Q19839 protein_id:CAA92464.1 [wormpep150.fasta]
  • 03271 WBGene00009186 esterase status:Confirmed TR:Q19839 protein_id:CAA92464.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • arylacetamide deacetylase family member (4K352) [Caenorhabditis elegans]gi|3876350|emb|CAA92464.1| Hypothetical protein F27C8.6 [Caenorhabditis elegans]gi|7499999|pir||T21450 hypothetical protein F27C8.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • esterase status:Confirmed TR:Q19839 protein_id:CAA92464.1 [wormpep115.fasta.reversed]
  • CE03271 esterase status:Partially_confirmed TR:Q19839 protein_id:CAA92464.1 [wormpep80.hongbin]
  • CE03271 WBGene00009186 esterase status:Confirmed UniProt:Q19839_CAEEL protein_id:CAA92464.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE03271 WBGene00009186 esterase status:Confirmed UniProt:Q19839_CAEEL protein_id:CAA92464.1| [wormORF-contam.fasta]
  • F27C8.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F27C8.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE03271 WBGene00009186 esterase status:Confirmed UniProt:Q19839 protein_id:CAA92464.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE03271 WBGene00009186 locus:trcs-1 esterase status:Confirmed UniProt:Q19839 protein_id:CAA92464.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE03271 WBGene00009186 locus:trcs-1 status:Confirmed UniProt:Q19839 protein_id:CAA92464.1 [wormpep246-ecoli-contam.fasta]
  • TRansport of membrane to Cell Surface OS=Caenorhabditis elegans GN=trcs-1 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 428 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    metabolic process [IEALink to PubMed article]
    oviposition [IMPLink to PubMed article]
    Molecular Function: hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKAKKESNY TKGIVPVLIT IFLLITGYAL YKPLPEGFTI SKWDRAVMHV VEPALRVAYY  60
   61 YPSRMFTKPS NMVQWTRGAL NTLSKTLGLL VNTHGQVDIK WHKWNETPVK VYRPTNNKTS 120
  121 TDGAVLFIHG GGFALGNVDM YDSLVKRMAY EMKTLFISIE YRLSPETVFP GGILDCEAAI 180
  181 DHFFDFGAVQ FGVNTSKVVI MGDSAGGNLA TVIAQRRAAR NSFPKLAGQV LIYPLLQMAD 240
  241 MQTVSYRYFH SRLRGYALVD PESVAYYYMF YAGIDMDEKA YLVPSVISNG HVANHLQSEA 300
  301 SEIMSYKSVI EMKHNYKNHS ITERWEVSQS YEAQDLMEPF LTNPDFSPLM RKDLSNLPPT 360
  361 MVITCEFDIL RDEGLIYGER LKVSGVPTTT IHYENGFHAM LNFHSELDEA SKSVDDIEQW 420
  421 TLNAINNA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..428] PSI-BLAST 69.30103 Mammalian carboxylesterase (liver carboxylesterase I)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  1.95306186248921 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • lipase activity
    		•  0.849473630399459 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.424330502936163 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.282381128231187 bayes_pls_golite062009
  • binding
    		•  0.112743564301567 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle