YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE03271
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKAKKESNY TKGIVPVLIT IFLLITGYAL YKPLPEGFTI SKWDRAVMHV VEPALRVAYY  60
   61 YPSRMFTKPS NMVQWTRGAL NTLSKTLGLL VNTHGQVDIK WHKWNETPVK VYRPTNNKTS 120
  121 TDGAVLFIHG GGFALGNVDM YDSLVKRMAY EMKTLFISIE YRLSPETVFP GGILDCEAAI 180
  181 DHFFDFGAVQ FGVNTSKVVI MGDSAGGNLA TVIAQRRAAR NSFPKLAGQV LIYPLLQMAD 240
  241 MQTVSYRYFH SRLRGYALVD PESVAYYYMF YAGIDMDEKA YLVPSVISNG HVANHLQSEA 300
  301 SEIMSYKSVI EMKHNYKNHS ITERWEVSQS YEAQDLMEPF LTNPDFSPLM RKDLSNLPPT 360
  361 MVITCEFDIL RDEGLIYGER LKVSGVPTTT IHYENGFHAM LNFHSELDEA SKSVDDIEQW 420
  421 TLNAINNA

Type	Start	End	Confidence
Cytoplasmic	1	9	0.78
Transmembrane Helix	10	31	0.76
Non-Cytoplasmic	32	428	0.98