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Protein Overview: CE02292

General Information:
Name(s) found: CE02292 [WormBase]
Description(s) found:
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  • WBGene00011040 status:Confirmed UniProt:Q21765 protein_id:CAA88728.1 [WormBase]
  • pir||T23941 hypothetical protein R05H5.5 - Caenorhabditis elegans [NCBI NR]
  • gi|3878801|emb|CAA88728.1| C. elegans protein R05H5.5, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17535463|ref|NP_496202.1| hypothetical protein R05H5.5 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE02292 WBGene00011040 status:Partially_confirmed TR:Q21765 protein_id:CAA88728.1 [wormpep150.fasta]
  • 02292 WBGene00011040 status:Partially_confirmed TR:Q21765 protein_id:CAA88728.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted protein like (2K490) [Caenorhabditis elegans]gi|3878801|emb|CAA88728.1| Hypothetical protein R05H5.5 [Caenorhabditis elegans]gi|7506333|pir||T23941 hypothetical protein R05H5.5 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q21765 protein_id:CAA88728.1 [wormpep115.fasta.reversed]
  • CE02292 status:Predicted TR:Q21765 protein_id:CAA88728.1 [wormpep80.hongbin]
  • CE02292 WBGene00011040 status:Partially_confirmed UniProt:Q21765_CAEEL protein_id:CAA88728.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE02292 WBGene00011040 status:Partially_confirmed UniProt:Q21765_CAEEL protein_id:CAA88728.1| [wormORF-contam.fasta]
  • R05H5.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein R05H5.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE02292 WBGene00011040 status:Partially_confirmed UniProt:Q21765 protein_id:CAA88728.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE02292 WBGene00011040 status:Confirmed UniProt:Q21765 protein_id:CAA88728.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_R05H5.5 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 236 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKTRYKNQS ASVSKEKEEF ACVNCQEFTS TLYKKYSEGV IRLTECDNCG EVVDKYIEYD  60
   61 VVLVVIDLML QYVQAYRHLL LNVRIQRPER LFVIFWLSHA ADVWIRDNKN NEAKELTDQE 120
  121 WMFYRCLLLS VVEIFSFISA ILMYSLWKND ETNYRQLIAS TLLGYYGNVA VFISFVFCLS 180
  181 HRTSYQIVMQ IFLLVSHIQV QRVLFPAVSA TDNIIVVLTA KTFSTYTGSL FTSSVF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] FFAS03 1.04 Solution structure of two zf-C2H2 domains from human Zinc finger protein 512
    2 View Details [86..236] Pfam 25.920819 No description for PF04161.4 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.22103207030906 bayes_pls_golite062009
  • DNA binding
    		•  0.46443930138134 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.415392385343926 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.334596448084096 bayes_pls_golite062009
  • protein binding
    		•  0.256933966897135 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle