YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE02292
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKTRYKNQS ASVSKEKEEF ACVNCQEFTS TLYKKYSEGV IRLTECDNCG EVVDKYIEYD  60
   61 VVLVVIDLML QYVQAYRHLL LNVRIQRPER LFVIFWLSHA ADVWIRDNKN NEAKELTDQE 120
  121 WMFYRCLLLS VVEIFSFISA ILMYSLWKND ETNYRQLIAS TLLGYYGNVA VFISFVFCLS 180
  181 HRTSYQIVMQ IFLLVSHIQV QRVLFPAVSA TDNIIVVLTA KTFSTYTGSL FTSSVF

Type	Start	End	Confidence
Cytoplasmic	1	122	0.95
Transmembrane Helix	123	146	0.88
Non-Cytoplasmic	147	161	0.79
Transmembrane Helix	162	181	0.91
Cytoplasmic	182	236	0.61