| Protein: | CE02292 |
| Organism: | Caenorhabditis elegans |
| Length: | 236 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02292.
| Description | E-value | Query Range |
Subject Range |
|
|
275.0 | [0..1] | [235..1] |
|
|
247.0 | [0..3] | [209..10] |
|
|
242.0 | [0..18] | [204..30] |
|
|
239.0 | [0..18] | [212..40] |
|
|
238.0 | [0..18] | [209..26] |
|
|
235.0 | [0..10] | [209..33] |
|
|
235.0 | [0..18] | [233..30] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MWKTRYKNQS ASVSKEKEEF ACVNCQEFTS TLYKKYSEGV IRLTECDNCG EVVDKYIEYD 60
61 VVLVVIDLML QYVQAYRHLL LNVRI
|
| Detection Method: |  |
| Confidence: | 1.04 |
| Match: | 2ctdA |
| Description: | Solution structure of two zf-C2H2 domains from human Zinc finger protein 512 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.22103207030906 | bayes_pls_golite062009 |
| DNA binding | 0.46443930138134 | bayes_pls_golite062009 |
| nucleic acid binding | 0.415392385343926 | bayes_pls_golite062009 |
| transcription regulator activity | 0.334596448084096 | bayes_pls_golite062009 |
| protein binding | 0.256933966897135 | bayes_pls_golite062009 |
|
Region A: Residues: [86-236] |
1 11 21 31 41 51
| | | | | |
1 QRPERLFVIF WLSHAADVWI RDNKNNEAKE LTDQEWMFYR CLLLSVVEIF SFISAILMYS 60
61 LWKNDETNYR QLIASTLLGY YGNVAVFISF VFCLSHRTSY QIVMQIFLLV SHIQVQRVLF 120
121 PAVSATDNII VVLTAKTFST YTGSLFTSSV F
|
| Detection Method: | |
| Confidence: | 25.920819 |
| Match: | PF04161.4 |
| Description: | No description for PF04161.4 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
