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Protein Overview: CE01673

General Information:
Name(s) found: CE01673 [WormBase]
Description(s) found:
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  • WBGene00011847 locus:chil-26 status:Predicted UniProt:Q22596 protein_id:CAA87663.1 [WormBase]
  • pir||T25010 hypothetical protein T19H5.2 - Caenorhabditis elegans [NCBI NR]
  • gi|3879926|emb|CAA87663.1| Hypothetical protein T19H5.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|17536347|ref|NP_496034.1| hypothetical protein T19H5.2 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE01673 WBGene00011847 status:Predicted TR:Q22596 protein_id:CAA87663.1 [wormpep150.fasta]
  • 01673 WBGene00011847 status:Predicted TR:Q22596 protein_id:CAA87663.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, chitinase like family member (2J767) [Caenorhabditis elegans]gi|3879926|emb|CAA87663.1| Hypothetical protein T19H5.2 [Caenorhabditis elegans]gi|7508012|pir||T25010 hypothetical protein T19H5.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q22596 protein_id:CAA87663.1 [wormpep115.fasta.reversed]
  • CE01673 status:Predicted TR:Q22596 protein_id:CAA87663.1 [wormpep80.hongbin]
  • CE01673 WBGene00011847 status:Predicted UniProt:Q22596_CAEEL protein_id:CAA87663.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE01673 WBGene00011847 status:Predicted UniProt:Q22596_CAEEL protein_id:CAA87663.1| [wormORF-contam.fasta]
  • T19H5.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T19H5.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE01673 WBGene00011847 status:Predicted UniProt:Q22596 protein_id:CAA87663.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE01673 WBGene00011847 locus:chil-26 status:Predicted UniProt:Q22596 protein_id:CAA87663.1 [wormpep246-ecoli-contam.fasta]
  • CHItinase-Like OS=Caenorhabditis elegans GN=chil-26 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 358 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSVKDQEVM LLISDRLLQG GKYNFKNIFR KDDRDFKTRK VIIVLVICLI FIITDLFIIR  60
   61 SHLHQISSRN QDTNSISALL NKQGVTFVKG MSSLKYKIFA FAQLNTNGSL QFESAISKQK 120
  121 FLNLNRKSKH INNNVNRILS IGGTNYSEKL SIMLQDLKKT RRFIMSIIRF LKDNELDGVE 180
  181 LLWNRNTEET LYCELLQHLK MGLEKQEKQY SISLRVPQTG IGKWHIGCEL EDQENADSIN 240
  241 LISMAEYENQ LFGSGGVIRI SEAFNTAWEM KYHACNSNQS SKFNLVIPTI EQTEQIDMQY 300
  301 VWNPEKKEIQ RFNSSTKTEY TKLQMGGVSI WSRDMDYHNN IQLDSYFFER ICSQELGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..358] PSI-BLAST 63.221849 Chitinase-3 like protein 1 (GP-39, YKL-40)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.00445818053203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle