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Protein Overview: cdl-1

General Information:
Name(s) found: cdl-1 / CE01616 [WormBase]
Description(s) found:
Found 25 descriptions.
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  • WBGene00000411 locus:cdl-1 Histone RNA hairpin-binding protein status:Confirmed UniProt:Q09599 protein_id:CAA86782.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 367 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TASLink to PubMed article]
    cytoplasm [TASLink to PubMed article]
    Biological Process: embryonic development [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    mitotic chromosome condensation [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    apoptosis [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: mRNA 3'-UTR binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKTPTKGT RSSPRKKAWG SPIKATAKFQ SDIFSVEDFA DLSNRSWAEV TEEDDELASR  60
   61 LEEERRCKSE SRRKGQPKRA QNSQNKPKFV RSLELTNEVF QSTSSRRSQR SKSRTRNGDT 120
  121 ITTVEEHTET VVMESSSGPI SRKRCLSNAS TINEGASPSK RRPETGKSNR KAPRGRLFTN 180
  181 GGSDSSSVAS SPSRRDHWEE PTLGWCTDEA VLKRRSREID RAKEKAVYQR YTSEVPLRDR 240
  241 IKGQHPRTPN KLINFSRRSW DTQIKKWKRS LYEYCGEEPS DSVNTSFCYS DSDALSEAGD 300
  301 NDKEIENRSV LRDLVIPVTM RPEVDSMASL LGKFDVDSQM GMDESTLKAS TNTDPSAPTD 360
  361 FSKMSSH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] deduced N/A No confident structure predictions are available.
    2 View Details [197..287] MSA 14.038986 View MSA. No confident structure predictions are available.
    3 View Details [288..367] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle