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Protein Overview: rnf-121

General Information:
Name(s) found: rnf-121 / CE01496 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00007626 locus:rnf-121 Glutaredoxin, Zinc finger, C3HC4 type (RING finger) status:Partially_confirmed UniProt:Q09251 protein_id:CAA86743.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 409 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [IDA]
    integral to membrane [IEALink to PubMed article]
    Golgi membrane [IDA]
    sarcoplasmic reticulum membrane [IDA]
    Biological Process: endoplasmic reticulum unfolded protein response [IMP]
    ER-associated protein catabolic process [IMP]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFSYFISIF TANLSPTFPC RKVNQLNYFY QLLNLKCFFR SIFKIGHFPR GSPLYLLEKS  60
   61 ITFSKIISIF SGHRMGQHGA IRLQNEVQEG MPPPHELTEE EQWAEEHRKM HEKHKGHEAM 120
  121 HMEMMVIFMI SVIVGQIFLV TWKRKHFKSY QMCTLIGMLT IPVYVCFNRS WYRFLATWLV 180
  181 FCIFSAFIWL KASAQHISGG TPRFVYKWFL FLHKLSYVLG VVGYLIMMGA LLGFHVLFGV 240
  241 SQPTLMDAGI LFMFYGVYYG VLGRDFAHIC TARMASRIGY YTPEGLPKKH LEDGVCAVCG 300
  301 GRLDDSEHVH DADAVVTTKM VEDEDEKLYK LSCGHVFHEF CIRGWVVVGK LQTCPYCKER 360
  361 VDLQRMFKNP WEKPHLFYGK LLDWIRYLVC WQPLIVTAVQ GLTTWMGLE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] deduced N/A No confident structure predictions are available.
    2 View Details [146..291] MSA 1.489995 View MSA. No confident structure predictions are available.
    3 View Details [292..409] PSI-BLAST 8.0 Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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