| Protein: | rnf-121 |
| Organism: | Caenorhabditis elegans |
| Length: | 409 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rnf-121.
| Description | E-value | Query Range |
Subject Range |
|
|
348.0 | [0..84] | [409..16] |
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MTFSYFISIF TANLSPTFPC RKVNQLNYFY QLLNLKCFFR SIFKIGHFPR GSPLYLLEKS 60
61 ITFSKIISIF SGHRMGQHGA IRLQNEVQEG MPPPHELTEE EQWAEEHRKM HEKHKGHEAM 120
121 HMEMMVIFMI SVIVGQIFLV TWKRK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [146-291] |
1 11 21 31 41 51
| | | | | |
1 HFKSYQMCTL IGMLTIPVYV CFNRSWYRFL ATWLVFCIFS AFIWLKASAQ HISGGTPRFV 60
61 YKWFLFLHKL SYVLGVVGYL IMMGALLGFH VLFGVSQPTL MDAGILFMFY GVYYGVLGRD 120
121 FAHICTARMA SRIGYYTPEG LPKKHL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [292-409] |
1 11 21 31 41 51
| | | | | |
1 EDGVCAVCGG RLDDSEHVHD ADAVVTTKMV EDEDEKLYKL SCGHVFHEFC IRGWVVVGKL 60
61 QTCPYCKERV DLQRMFKNPW EKPHLFYGKL LDWIRYLVCW QPLIVTAVQG LTTWMGLE
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1v87A |
| Description: | Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
