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Protein Overview: sra-1

General Information:
Name(s) found: sra-1 / CE01458 [WormBase]
Description(s) found:
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  • WBGene00005027 locus:sra-1 Serpentine receptor class alpha-1 status:Partially_confirmed UniProt:Q09203 protein_id:CAA88078.1 [WormBase]
  • pir||T18614 hypothetical protein AH6.4 - Caenorhabditis elegans [NCBI NR]
  • gi|3873632|emb|CAA88078.1| C. elegans protein AH6.4, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17535741|ref|NP_496042.1| Serpentine Receptor, class A (alpha) family member (sra-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|1584486|prf||2123261A chemosensory receptor [NCBI NR]
  • gi|1176644|sp|Q09203.1|SRA1_CAEEL RecName: Full=Serpentine receptor class alpha-1; Short=Protein sra-1 [NCBI NR]
  • Serpentine receptor class alpha-1 OS=Caenorhabditis elegans GN=sra-1 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE01458 WBGene00005027 locus:sra-1 7TM chemoreceptor, sra family status:Predicted SW:Q09203 protein_id:CAA88078.1 [wormpep150.fasta]
  • 01458 WBGene00005027 locus:sra-1 7TM chemoreceptor, sra family status:Predicted SW:Q09203 protein_id:CAA88078.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • serpentine Receptor, class A (alpha) (sra-1) [Caenorhabditis elegans]gi|3873632|emb|CAA88078.1| Hypothetical protein AH6.4 [Caenorhabditis elegans]gi|7494684|pir||T18614 hypothetical protein AH6.4 - Caenorhabditis elegansgi|1176644|sp|Q09203|SRA1_CAEEL [nrdb_11152004_Chlamydomonas]
  • locus:sra-1 7TM chemoreceptor, sra family status:Predicted SW:Q09203 protein_id:CAA88078.1 [wormpep115.fasta.reversed]
  • CE01458 locus:sra-1 status:Predicted SW:Q09203 protein_id:CAA88078.1 [wormpep80.hongbin]
  • CE01458 WBGene00005027 locus:sra-1 7TM chemoreceptor, sra family status:Partially_confirmed UniProt:SRA1_CAEEL protein_id:CAA88078.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE01458 WBGene00005027 locus:sra-1 7TM chemoreceptor, sra family status:Partially_confirmed UniProt:SRA1_CAEEL protein_id:CAA88078.1| [wormORF-contam.fasta]
  • Hypothetical protein AH6.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Serpentine receptor class alpha-1 (Protein sra-1) [nr-271106-contam.fasta]
  • Serpentine Receptor, class A (alpha) family member (sra-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • chemosensory receptor [nr-271106-contam.fasta]
  • CE01458 WBGene00005027 locus:sra-1 7TM chemoreceptor, sra family status:Partially_confirmed UniProt:Q09203 protein_id:CAA88078.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE01458 WBGene00005027 locus:sra-1 status:Partially_confirmed UniProt:Q09203 protein_id:CAA88078.1 Serpentine receptor class alpha-1 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 331 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNITSASAA QIDHASSWNF RFAVFCSQLS IISTFILSVI AVKWIFTKST FQTSTKIILV  60
   61 FNFVYANIHQ FMYAIISLGM AYKGIFLLDE TCEWLITEKD CLLYTEVLYV GISGMIYSQT 120
  121 GILIERAFAT LYRNYTAKIS RLVGIIISTF VLIMSIATYQ IIISDDPLEG VVLSCFVPAQ 180
  181 HSAQRANTFL FIALILTFVN LISSAAVMFY NKRLEYSIRY KVRERFKKRE AIYSTHTICV 240
  241 VCMAQFVTML VYSSGVLILR CNMSNILLTT FYKLITWVYT VQYNALLFPL ILIFRIRATK 300
  301 LSRTKKIQDI TSANQSQTEH YNQITSAWKI T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..331] PSI-BLAST 47.39794 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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