| Protein: | sra-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 331 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-1.
| Description | E-value | Query Range |
Subject Range |
|
|
192.0 | [0..3] | [309..353] |
|
Region A: Residues: [1-331] |
1 11 21 31 41 51
| | | | | |
1 MSNITSASAA QIDHASSWNF RFAVFCSQLS IISTFILSVI AVKWIFTKST FQTSTKIILV 60
61 FNFVYANIHQ FMYAIISLGM AYKGIFLLDE TCEWLITEKD CLLYTEVLYV GISGMIYSQT 120
121 GILIERAFAT LYRNYTAKIS RLVGIIISTF VLIMSIATYQ IIISDDPLEG VVLSCFVPAQ 180
181 HSAQRANTFL FIALILTFVN LISSAAVMFY NKRLEYSIRY KVRERFKKRE AIYSTHTICV 240
241 VCMAQFVTML VYSSGVLILR CNMSNILLTT FYKLITWVYT VQYNALLFPL ILIFRIRATK 300
301 LSRTKKIQDI TSANQSQTEH YNQITSAWKI T
|
| Detection Method: |  |
| Confidence: | 47.39794 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
