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Protein Overview: CE00853

General Information:
Name(s) found: CE00853 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00007130 Uncharacterized protein B0272.4 status:Confirmed UniProt:P41942 protein_id:CAA86314.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 255 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEALink to PubMed article]
    menaquinone biosynthetic process [IEALink to PubMed article]
    Molecular Function: naphthoate synthase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSGLILTER KNNVLWVTLN RPKKFNALTR QMFLDLCTVF NDAADDDDIA FVVFTGGKGK  60
   61 YYCAGSDFSP AELSTLTDIQ EHGYKLFVDI LIAFPKPIIA LVNGHAVGVS VTMLGVMDAV 120
  121 IAIDTATFAT PFADIGVCPE ACSSYTLPRI MGHQKAAALM MFSEKFTAHE AHIAGLVTQI 180
  181 LPAATFEKDA KKIIDRYSKL SPITMKVAKE LMRTTQIKDE LLTVNRKEQV HLNGMFSHED 240
  241 TIARLTAKFV KPSKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..255] PSI-BLAST 49.0 The crystal structure of human peroxisomal delta3, delta2 enoyl CoA isomerase (PECI)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • enoyl-CoA hydratase activity
    		•  3.92947460544831 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  3.59076614105466 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  3.4980371783229 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  3.34692152434862 bayes_pls_golite062009
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  2.44182589784656 bayes_pls_golite062009
  • dodecenoyl-CoA delta-isomerase activity
    		•  1.80820904754223 bayes_pls_golite062009
  • catalytic activity
    		•  1.46154163027498 bayes_pls_golite062009
  • propionyl-CoA carboxylase activity
    		•  1.20853698666984 bayes_pls_golite062009
  • long-chain-3-hydroxyacyl-CoA dehydrogenase activity
    		•  1.03484393216342 bayes_pls_golite062009
  • ligase activity
    		•  0.98581896521131 bayes_pls_golite062009
  • long-chain-enoyl-CoA hydratase activity
    		•  0.571617594666499 bayes_pls_golite062009
  • 3-hydroxybutyryl-CoA epimerase activity
    		•  0.241955774397835 bayes_pls_golite062009
  • racemase and epimerase activity, acting on hydroxy acids and derivatives
    		•  0.099208209617217 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, transposing C=C bonds
    		•  0.0918189681606029 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle