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Protein Overview: gi|25361752

General Information:
Name(s) found: gi|25361752 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|25361752|pir||H88578 protein ced-9 [imported] - Caenorhabditis elegans [NCBI NR]
    • Organism: Caenorhabditis elegans
    Length: 261 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGEMKEFL GIKGTEPTDF GINSDAQDLP SPSRQASTRR MSIGESIDGK INDWEEPRLD  60
   61 IEGFVVDYFT HRIRQNGMEW FGAPGLPCGV QPEHEMMRVM GTIFEKKHAE NFETFCEQLL 120
  121 AVPRISFSLY QDVVRTVGNA QTDQCPMSYG RLIGLISFGG FVAAKMMESV ELQGQVRNLF 180
  181 VYTSLFIKTR IRNNWKEHNR SWDDFMTLGK QMKEDYERAE AEKVGRRKQN RRWSMIGAGV 240
  241 TAGAIGIVGV VVCGRMMFSL K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..261] PSI-BLAST 53.0 Structure of a CED-4/CED-9 complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.68532136060219 bayes_pls_golite062009
  • protein binding
    		•  1.27467799975395 bayes_pls_golite062009
  • BH3 domain binding
    		•  0.73278409982916 bayes_pls_golite062009
  • protein dimerization activity
    		•  0.717110763227649 bayes_pls_golite062009
  • BH domain binding
    		•  0.513227895728431 bayes_pls_golite062009
  • protein heterodimerization activity
    		•  0.0857017957923898 bayes_pls_golite062009
  • caspase inhibitor activity
    		•  0.0810673056766702 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle