YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25361752
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGEMKEFL GIKGTEPTDF GINSDAQDLP SPSRQASTRR MSIGESIDGK INDWEEPRLD  60
   61 IEGFVVDYFT HRIRQNGMEW FGAPGLPCGV QPEHEMMRVM GTIFEKKHAE NFETFCEQLL 120
  121 AVPRISFSLY QDVVRTVGNA QTDQCPMSYG RLIGLISFGG FVAAKMMESV ELQGQVRNLF 180
  181 VYTSLFIKTR IRNNWKEHNR SWDDFMTLGK QMKEDYERAE AEKVGRRKQN RRWSMIGAGV 240
  241 TAGAIGIVGV VVCGRMMFSL K

Type	Start	End	Confidence
Cytoplasmic	1	232	0.71
Transmembrane Helix	233	258	0.86
Non-Cytoplasmic	259	261	0.69