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Protein Overview: SPCC970.02

General Information:
Name(s) found: SPCC970.02 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • mannan endo-1,6-alpha-mannosidase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: anchored to external side of plasma membrane [ISSLink to PubMed article]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: fungal-type cell wall biogenesis [ISSLink to PubMed article]
    cellular oligosaccharide catabolic process [ICLink to PubMed article]
    extracellular polysaccharide metabolic process [IC]
    Molecular Function: mannan endo-1,6-alpha-mannosidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTIFISLA TILFSFAEAI SVDLNDTSSV DLATSLVADG LLNYYAGQHK GGTIGMFLPP  60
   61 AYWWEAGAAW NGLLNRYIAT GNSTYNELVK TSMLYQSGED SDYMPSNYTT SEGNDDQAFW 120
  121 GLTVISAAEA NFSNPAADEP QWLELAQAVF NQQVTRWDTD HCNGGLRWQI TEFNSGYNYK 180
  181 NTVSNGAFFQ LAARLARFTD NDTYAEWANV AYDWSQRIGF IQEDYTVFDG SSIKDNCSSI 240
  241 EITQWTYNIG LYMAGAAYMY NYTNSTVWKT RVEGFANKTA KTFFFKDIMF EPVCEIALSC 300
  301 NYDQTSFKGF LTRFMVYTAQ MAPFTAPLLE PLLISTAKAA AGACCGGYDG VTCGVQWWWN 360
  361 NDTWDGLYGL GEQMSALEAI QAPLLLKSLQ VFKASNGGSS TGDPNAGLYT APVSFANKNF 420
  421 ENLRKHWMLL GFFLLVPTLV LY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..362] PSI-BLAST 33.221849 Crystal Structure of Unsaturated Glucuronyl Hydrolase, Responsible for the Degradation of Glycosaminoglycan, from Bacillus sp. GL1 at 1.8 A Resolution
    2 View Details [363..442] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • trehalase activity
    		•  4.82932126310383 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  4.20661739420075 bayes_pls_golite062009
  • alpha,alpha-trehalase activity
    		•  4.18601176775771 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  3.49882811932206 bayes_pls_golite062009
  • hydrolase activity
    		•  2.58427541503761 bayes_pls_golite062009
  • glucosidase activity
    		•  1.57801734898595 bayes_pls_golite062009
  • catalytic activity
    		•  1.16285856935495 bayes_pls_golite062009
  • binding
    		•  1.06330183651166 bayes_pls_golite062009
  • glucan 1,4-alpha-glucosidase activity
    		•  1.02505760583409 bayes_pls_golite062009
  • protein binding
    		•  0.18984948020481 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.0683547784833305 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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