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Protein Overview: SPAC25B8.02

General Information:
Name(s) found: SPAC25B8.02 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • histone deacetylase complex subunit Sds3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 267 amino acids

    Gene Ontology:
    Cellular Component: Rpd3L-Expanded complex [IDALink to PubMed article]
    Rpd3L complex [IDALink to PubMed article]
    Rpd3S complex [IDALink to PubMed article]
    Biological Process: chromatin remodeling [NAS]
    chromatin silencing [ISSLink to PubMed article]
    histone deacetylation [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVLSRVFDN EKEELDPLLN NPLTASEFRA KKAELEAELE SIRNGTCKTL LDLADELRRS  60
   61 RDEELEIAER WRTFLVNRAQ EEYEVEMKAA KEEYEYRCKT LKEMVLSHLN EKKRKIYEAK 120
  121 DMFDIGSESS TLLLHDASSQ FIDRRKLRHR RNAGNQQNTQ QLPSLNFFDD YLLFPTDETA 180
  181 VIPQSVKNAV RNSVNSVKPT SAEASLFSPL LSMANANPTN GRERDPRASE RAERDREKAV 240
  241 EKGLSGATEE DIQSDLQLLK KELAKKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] PSI-BLAST 4.154902 No description for 2i1jA was found.
    2 View Details [198..267] MSA 1.022989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle