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Protein Overview: arb1

General Information:
Name(s) found: arb1 / SPAC140.03 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • argonaute binding protein 1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 399 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    ARC complex [IDALink to PubMed article]
    Biological Process: chromatin silencing at centromere [IMPLink to PubMed article]
    regulation of histone H3-K9 methylation [IMPLink to PubMed article]
    regulation of catalytic activity [ICLink to PubMed article]
    gene silencing by RNA [IMPLink to PubMed article]
    conversion of ds siRNA to ss siRNA involved in RNA interference [IMPLink to PubMed article]
    sphingolipid biosynthetic process [IMPLink to PubMed article]
    Molecular Function: ribonuclease inhibitor activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEGDFKNDS TGCIGDSVEF TTFKKRTGKS LGNRRKKRGL SGWEPYFQEP ELTAEEKLEN  60
   61 ETLYSRNIPL TVRMERFIQR YRSRRKWSDP TRIRLFTMYL DLGGVSTGQK QFTGGTDINN 120
  121 DAKAREVSAQ TTTDYIEYDI LDEYDIDFKW VAGVFLSSHI LYNAGLTKEE DLQIACQIVR 180
  181 NFLLSVLHNN VAPEFEDNIR DACLLAEQAE TELISNKRLS TKLPGRLQRA LASIHVDNYK 240
  241 GLWDKSQSDR TSDSSVNFIE SNNTKFMPND ELFEPDGISR FSTQQARDYI QRTLGPRYLT 300
  301 GKVVEQEYLT VKLVSKTLLN FSNQSLCKAV FIVWDPPGSK YSQDTNKERL EVILESDLLN 360
  361 NTVDGTHLEG SFTFLDNGLT ILDTVLAVLP TFYEEVKDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] deduced N/A No confident structure predictions are available.
    2 View Details [165..268] MSA 1.011968 View MSA. Confident ab initio structure predictions are available.
    3 View Details [269..399] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle