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Protein Overview: set9

General Information:
Name(s) found: set9 / SPCC4B3.12 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • histone lysine methyltransferase Set9 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 441 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear chromatin [ICLink to PubMed article]
    cell division site [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: DNA damage checkpoint [IGILink to PubMed article][IMPLink to PubMed article]
    [NOT]DNA replication checkpoint [IGILink to PubMed article][IMPLink to PubMed article]
    histone methylation [IMPLink to PubMed article]
    [NOT]regulation of transcription, DNA-dependent [IMPLink to PubMed article]
    chromatin silencing [IMPLink to PubMed article]
    cellular protein localization [IGILink to PubMed article]
    Molecular Function: histone methyltransferase activity (H4-K20 specific) [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQTNTHLET FSLFDDVCTC LLVDKVFYWS QIHKVRKLVD RSIERMESCS IINIITKYII  60
   61 EQTDLDQAAK NILQFRELDP LLRRLSSTSL LAFTRHLKYY LSLYLPSCKF EICSTNQYFS 120
  121 SSKPEACVIA RESINAGEDI TDLCGTIIKL SPKEERNIGI GKDFSILHSS RLDSMCLFLG 180
  181 PARFVNHDCN ANCRFNTSGK RIWLRCVRDI KPGEEITTFY SSNYFGLENC ECLCVSCERM 240
  241 GINGFKKLFH TSATSTSCSS KSSSDVSDLS SLPQSNRYVI SEEDRSFLNI WDSGGELSDA 300
  301 SSSDLDEEFS LFIPRHKKRV WSREKRLLSE MAITNHSPLL NVDDYRKFRE DLWKKRHGKR 360
  361 KVYQCSNCSQ TFINEDIQNS SAFCPKCIRH SKLFSLPWPC RHKVNRELKL EKEKEINTKR 420
  421 NLVTSSHSMS LRHKKAVDYQ S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] PSI-BLAST 39.045757 No description for 2o8jA was found.
    2 View Details [244..441] MSA 4.143959 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle