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Protein Overview: SPBC17A3.08

General Information:
Name(s) found: SPBC17A3.08 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • TatD [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 312 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: DNA catabolic process [ICLink to PubMed article]
    Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters [IEA]
    3'-5'-exodeoxyribonuclease activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASIRQAFVK SLRFYDIGYN ATDPVFRGIY HEKLKHPDDF DSIISRAKAV GVEKMMITGD  60
   61 NVENSEEALN LATNYECFTS TVGVHPCQAQ CFLRHSEGPE DYLVKLEALA NKGKASGKVV 120
  121 AFGEFGLDYD RLHYAPADVQ KMYFEEQLKV AVRVQLPLFL HSRNAENDFF AILEKYLPEL 180
  181 PKKGVVHSFT GSIDEMRRCI EHGLYVGVNG CSLKTEENLE VVRAIPLEKM LLETDAPWCE 240
  241 VRPSHAGHQF LKTKLPFDSC KKERFKEGCM IRGRNEPCNT YIVAEIVAAL KDISLEELSE 300
  301 QIWENSINLL SK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..312] PSI-BLAST 75.045757 No description for 2gzxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle