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Protein Overview: dcp1

General Information:
Name(s) found: dcp1 / SPBC3B9.21 [Sanger Pombe]
Description(s) found:
Found 22 descriptions.
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  • mRNA decapping complex subunit Dcp1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 127 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    mRNA cap binding complex [IDALink to PubMed article][IGILink to PubMed article]
    cytoplasmic mRNA processing body [IGILink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [IGILink to PubMed article]
    deadenylation-independent decapping of nuclear-transcribed mRNA [IMPLink to PubMed article]
    regulation of catalytic activity [ICLink to PubMed article]
    deadenylation-dependent decapping of nuclear-transcribed mRNA [IMPLink to PubMed article]
    Molecular Function: RNA 7-methylguanosine cap binding [IGILink to PubMed article]
    protein binding [IPILink to PubMed article]
    m7G(5')pppN diphosphatase activity [IDALink to PubMed article][IGILink to PubMed article]
    enzyme regulator activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDENILRNA VNLQVLKFHY PEIESIIDIA SHVAVYQFDV GSQKWLKTSI EGTFFLVKDQ  60
   61 RARVGYVILN RNSPENLYLF INHPSNVHLV DRYLIHRTEN QHVVGLWMFD PNDMSRIFNI 120
  121 VKESLLR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] FFAS03 5.57 Crystal structure of Dcp1p


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle