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Protein Overview: spo5

General Information:
Name(s) found: spo5 / SPBC29A10.02 [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • meiotic RNA-binding protein 1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 567 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][NASLink to PubMed article]
    cytoplasm [IDALink to PubMed articleLink to PubMed article]
    Mei2 nuclear dot [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ascospore formation [IMPLink to PubMed articleLink to PubMed article]
    nuclear envelope organization [IMPLink to PubMed article]
    reciprocal meiotic recombination [IMPLink to PubMed article]
    ascospore-type prospore membrane assembly [IMPLink to PubMed article]
    meiosis II [TASLink to PubMed article]
    ascospore-type prospore-specific spindle pole body modification [IMPLink to PubMed article]
    regulation of meiosis I [IEPLink to PubMed article][IMPLink to PubMed article]
    Molecular Function: RNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGIITPQKQ KQLMSSPSRD PLSTTELSTP TSQTTVDVND TKKSEGLDST IILLTPGTSP  60
   61 NATPGSSELG LSKKPNSIKN NTYSTAAQAA YLNRRAADQS TVMTTDPISY ANNNINNGTL 120
  121 PQQNAYYANS YYPSYYAQSQ AISNNRPGVS GFRPAFNSVA PCYGSQWQTH QSVHPYHVNN 180
  181 THQYLKPYVQ NVYPQMPSLN QPGLHIVNQP TYLAPVPSAT VPTNSVSLSM PSFSQGQKNI 240
  241 PAAINQEMSV GTTKENTNYL SQLVGLHPAI PPAIPSMFPM SHDNKKSNME STSRTRNVYI 300
  301 RGLPPNTSDE NLLLYTNRFG KVSSSKAIID METNLCKGYG FACFEEEKSA LICISAMTLC 360
  361 GYQCSFAKES FSARLQSLQD TESTNLYISN LPLHWNESDI STLFKPSKII SNRVLRDSKE 420
  421 QSRGVGFARM QDRKTAEDII NKFNNFVLDP ALPPLQIRFA DSTDQKKFKG QTQKRRLWRA 480
  481 REYSVLTKGM TANNAFSKVE EFANNSMPSK VGMYVPLESN TVYQHSPTYD TYGWQSMYPS 540
  541 YSVYPSNYEN SRSTTPYHAH PATSAAN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..289] PSI-BLAST 7.30103 Sec24
    2 View Details [290..481] PSI-BLAST 35.0 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
    3 View Details [482..567] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle