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Protein Overview: SPCC622.10c

General Information:
Name(s) found: SPCC622.10c [Sanger Pombe]
Description(s) found:
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  • pir||T41490 hypothetical protein SPCC622.10c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74627034|sp|O94598.1|SEC5_SCHPO RecName: Full=Exocyst complex component sec5 [NCBI NR]
  • gi|3821329|emb|CAA21866.1| exocyst complex subunit Sec5 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19075682|ref|NP_588182.1| exocyst complex subunit Sec5 (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • exocyst complex subunit Sec5 [Sanger Pombe]
  • Exocyst complex component sec5 OS=Schizosaccharomyces pombe GN=sec5 PE=1 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SEQUENCE ORPHAN: O94598; [pompepVF.fasta]
  • Hypothetical protein [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • Sequence orphan [4896.FASTAC]
  • |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|7491942|pir||T41490 hypothetical protein SPCC622.10c - fission yeast (Schizosaccharomyces pombe)gi|3821329|emb|CAA21866.1| sequence orphan [Schizosaccharomyces pombe] [nrdb_11152004_Chlamydomonas]
  • |||exocyst complex subunit Sec5p |Schizosaccharomyces pombe|chr 3|||Manual [pompep2242005.fasta]
  • (O94598) Hypothetical protein [pompep4896_normal_reversed]
  • |||exocyst complex subunit Sec5 |Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPCC622.10c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPCC622.10c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Exocyst complex component sec5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec5 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 815 amino acids

    Gene Ontology:
    Cellular Component: cell division site [IDALink to PubMed article]
    cell tip [IDALink to PubMed article]
    exocyst [ISSLink to PubMed article]
    Biological Process: exocytosis [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSADEEILAH YGLTSLSQDY WTEKPDFAIA NASVDVQSPT TGVHHERNRS EDILRTGGAT  60
   61 SETTKDASAA GPVTPSFAMK RSQTSVQPSM SSQIAIGGMR NPMATRKIAG TYRDAPDNSM 120
  121 QQTSTGVHRS SSWLTTDGTH QLLSLMETNF NKFIAAKETI DNVYAQIIST LSHAGPAKTM 180
  181 DMCEESISGA LQQLQLFNTE STNEVDISYG ELLVMRECEA LFTYPEKFRL YHKQEKYSLL 240
  241 MQEIENAKKL YEKDRERLAK VNPKLVYLVD HAWEIIQATI DGICASIWNQ ILQSQGDFAF 300
  301 VVRTLCDLLK LKPNPISGRD PVLYATVSQQ KYLYNLMKER FSYFEKIIKS RQEDFSKLSC 360
  361 TRASPMLVWR AVARGCNLDY TLRGRPEVFA GMQLIEWANA CVLKIVREIK EVELYAKEFI 420
  421 SGIQQASYPE AAKHYGRDPK QMGVVVEKLN SQCLEMVYSF VGERGERLEM DGAFVLIQLH 480
  481 YFQRVADLLP KRIRTVFSMA ATRCIVDTWM LQHAPQSKSA NIEEMFIVDA NENQVLEPEL 540
  541 MVVDVLRELN KLYIPPHREE IVREIHHAFY KVLYANARFP SMSVSMANWE SDVWSLASST 600
  601 LIDFVQHRNQ HDMKKLASKM TTSLPVFSTS ITRSDVLHFV TRLLNLRSRL VPYQKFLLQT 660
  661 FPLNEVSPSL DPRISKSLRN LQDLYKLLAI RDTSFSNTTP SSISKLSIQP PTFQLFSTLE 720
  721 TIYLELKDSM PPNEAADWMI ATTSCMLAQF ALHSPYAFFH DIPSISHFLN KCLPPTILDL 780
  781 LQQIQRKAEA SSISPTTETA TKTRLKFQFI EMIFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] MSA 7.084996 View MSA. No confident structure predictions are available.
    2 View Details [170..360] MSA 3.082976 View MSA. No confident structure predictions are available.
    3 View Details [361..478] deduced N/A Confident ab initio structure predictions are available.
    4 View Details [479..698] deduced N/A No confident structure predictions are available.
    5 View Details [699..815] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle