YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC622.10c
Organism:	Schizosaccharomyces pombe
Length:	815 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC622.10c.

Description	E-value	Query Range	Subject Range
gi\|145019625, gi... - gi\|39971669\|ref\|XP_367225.1\| hypothetical protein MGG_07150 [Magnaporthe grisea 70-15], gb\|EAA56795....	431.0	[0..4]	[498..5]
gi\|42554293, gi\|... - gi\|46136127\|ref\|XP_389755.1\| hypothetical protein FG09579.1 [Gibberella zeae PH-1], gi\|42554293\|gb\|E...	428.0	[0..4]	[498..5]
gi\|28923886, gi\|... - gi\|32415852\|ref\|XP_328404.1\| hypothetical protein [Neurospora crassa], gi\|28923886\|gb\|EAA33048.1\| hy... gi\|85106973 - gi\|85106973\|ref\|XP_962284.1\| hypothetical protein [Neurospora crassa OR74A]	424.0	[0..1]	[498..1]
gi\|42820683 - gi\|42820683\|emb\|CAF31996.1\| hypothetical protein [Aspergillus fumigatus] gi\|70995788, gi\|... - gi\|70995788\|ref\|XP_752649.1\| Exocyst complex component Sec5 [Aspergillus fumigatus Af293], gi\|668502... gi\|159131402 - gi\|159131402\|gb\|EDP56515.1\| Exocyst complex component Sec5, putative [Aspergillus fumigatus A1163]	408.0	[0..4]	[498..3]
gi\|116196028, gi... - gi\|88180525\|gb\|EAQ87993.1\| hypothetical protein CHGG_04612 [Chaetomium globosum CBS 148.51], gi\|1161...	397.0	[0..4]	[498..5]
EXOC2_MOUSE - Exocyst complex component 2 OS=Mus musculus GN=Exoc2 PE=1 SV=1	373.0	[0..72]	[488..123]
EXOC2_RAT - Exocyst complex component 2 OS=Rattus norvegicus GN=Exoc2 PE=1 SV=1	371.0	[0..72]	[488..123]
gi\|114605157 - gi\|114605157\|ref\|XP_518202.2\| PREDICTED: Sec5 protein [Pan troglodytes]	369.0	[0..72]	[517..123]
EXOC2 - exocyst complex component 2	368.0	[0..72]	[517..123]
gi\|55730636 - gi\|55730636\|emb\|CAH92039.1\| hypothetical protein [Pongo abelii] gi\|197100134 - gi\|197100134\|ref\|NP_001126186.1\| exocyst complex component 2 [Pongo abelii]	368.0	[0..72]	[517..123]

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Predicted Domain #1

Region A:
Residues: [1-169]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSADEEILAH YGLTSLSQDY WTEKPDFAIA NASVDVQSPT TGVHHERNRS EDILRTGGAT  60
   61 SETTKDASAA GPVTPSFAMK RSQTSVQPSM SSQIAIGGMR NPMATRKIAG TYRDAPDNSM 120
  121 QQTSTGVHRS SSWLTTDGTH QLLSLMETNF NKFIAAKETI DNVYAQIIS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [170-360]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLSHAGPAKT MDMCEESISG ALQQLQLFNT ESTNEVDISY GELLVMRECE ALFTYPEKFR  60
   61 LYHKQEKYSL LMQEIENAKK LYEKDRERLA KVNPKLVYLV DHAWEIIQAT IDGICASIWN 120
  121 QILQSQGDFA FVVRTLCDLL KLKPNPISGR DPVLYATVSQ QKYLYNLMKE RFSYFEKIIK 180
  181 SRQEDFSKLS C

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [361-478]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRASPMLVWR AVARGCNLDY TLRGRPEVFA GMQLIEWANA CVLKIVREIK EVELYAKEFI  60
   61 SGIQQASYPE AAKHYGRDPK QMGVVVEKLN SQCLEMVYSF VGERGERLEM DGAFVLIQ

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.823	a.47.1	STAT

Predicted Domain #4

Region A:
Residues: [479-698]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHYFQRVADL LPKRIRTVFS MAATRCIVDT WMLQHAPQSK SANIEEMFIV DANENQVLEP  60
   61 ELMVVDVLRE LNKLYIPPHR EEIVREIHHA FYKVLYANAR FPSMSVSMAN WESDVWSLAS 120
  121 STLIDFVQHR NQHDMKKLAS KMTTSLPVFS TSITRSDVLH FVTRLLNLRS RLVPYQKFLL 180
  181 QTFPLNEVSP SLDPRISKSL RNLQDLYKLL AIRDTSFSNT

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5

Region A:
Residues: [699-815]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPSSISKLSI QPPTFQLFST LETIYLELKD SMPPNEAADW MIATTSCMLA QFALHSPYAF  60
   61 FHDIPSISHF LNKCLPPTIL DLLQQIQRKA EASSISPTTE TATKTRLKFQ FIEMIFS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.883	a.74.1	Cyclin-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits