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Protein Overview: snu66

General Information:
Name(s) found: snu66 / SPAC167.03c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • U4/U6 x U5 tri-snRNP complex subunit Snu66 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 649 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    U4/U6 x U5 tri-snRNP complex [ISSLink to PubMed article]
    spliceosomal complex [ICLink to PubMed article]
    Biological Process: RNA splicing, via transesterification reactions [ISSLink to PubMed article]
    nuclear mRNA splicing, via spliceosome [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGNSGASES ISIEETNRIR ISLGLKPLDI SEEKPQKELS DASVKSSYVD QEQQAYENWK  60
   61 KQEQEEINRK KEEELKSKFE KLRQKNERRR RTQGKTLAET LAEEDDQIDA NDTRAWILKM 120
  121 RNSSLNKNGN GLNFEAKNDA PRRSTLHSQN AGPNVNSSLE GMKIAHGFQD LNKNDGLVLT 180
  181 LKDADILDED NHDLLENVEM VQRKTKNERK EDNPYKPYED ENDFLQQSEA DQPSEDTFTT 240
  241 IGPQNSLTVN STIEKHKSDN KKTFGTLVSF VEPTITGSEQ SDYRQIKIKK SKKKKSKSDR 300
  301 RKRLVELDAE NENENDPSDF VLPNGQSNSD LSVEQDSAIF KEQKKMKIQK RMRELETQSF 360
  361 ADDDDLQQSI AMQRRLAQKR AKILKPEDVA EQLQNAEEVT DMTDSDTASG LIFDDTRAFV 420
  421 NSIKETENRE ALGSINEQAF EDSKDLNDTN SITGSSPTEE SNALVEDTSV DISATLEEAN 480
  481 TQQENAEDEP LVSDNVGAVL SLLRNKGVIK VSDEAKEKIQ KEEEYNKWFA RKQQARVELE 540
  541 EQRRKKKEQD RLSGKFEKMT QKEREQYAKK ENERWDKKIA EIELEQFHDY KPQVDIKYVD 600
  601 EFGVELGPKE AYKYLLSHQF HGKGSGKAKT EKRLRRIVEK EREERKPIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..417] PSI-BLAST 19.30103 Heavy meromyosin subfragment
    2 View Details [418..521] PSI-BLAST 5.69897 Tropomyosin
    3 View Details [522..649] MSA 2.239996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle