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Protein Overview: SPBC1105.08

General Information:
Name(s) found: SPBC1105.08 [Sanger Pombe]
Description(s) found:
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  • pir||T39285 probable transmembrane protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74626366|sp|Q9Y819.1|YON8_SCHPO RecName: Full=Transmembrane 9 superfamily protein C1105.08; Flags: Precursor [NCBI NR]
  • gi|5531470|emb|CAB50971.1| EMP70 family [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113256|ref|NP_596464.1| EMP70 family [Schizosaccharomyces pombe] [NCBI NR]
  • EMP70 family [Sanger Pombe]
  • Transmembrane 9 superfamily protein C1105.08 OS=Schizosaccharomyces pombe GN=SPBC1105.08 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE ENDOSOMAL MEMBRANE PROTEIN; SIMILAR TO S. CEREVISIAE EMP70: Q9Y819; [pompepVF.fasta]
  • Putative transmembrane protein [pompep4896]
  • |||MP70 protein family [pompepnew.fasta]
  • SPBC1105.08 protein [4896.FASTAC]
  • |||EMP70 family|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • putative transmembrane protein [Schizosaccharomyces pombe]gi|5531470|emb|CAB50971.1| SPBC1105.08 [Schizosaccharomyces pombe]gi|7493096|pir||T39285 probable transmembrane protein - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (Q9Y819) Putative transmembrane protein [pompep4896_normal_reversed]
  • hypothetical protein SPBC1105.08 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC1105.08 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Transmembrane 9 superfamily protein C1105.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1105.08 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 629 amino acids

    Gene Ontology:
    Cellular Component: fungal-type vacuole membrane [IDALink to PubMed article]
    integral to membrane [IEA]
    endosome membrane [ISSLink to PubMed article]
    Golgi apparatus [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPSIPSCS FSFVVFVSVL LQTCFSFQLT PLSPKNYPPG ASIDTTVNTI SPFIGDGRGS  60
   61 DIFNYEYYDE RFHFCRPENI AKQSESLGSV LFGDRLYNSP IEIKMLENQD CVPLCASIIP 120
  121 SSDVSFIRDL ISKNYVVNWN IDNLPVATYL EGTNSKNYSL SPGFPLGKNT EKGVILFNHY 180
  181 DIVIEYHTTS SDQHRVVGAY VKPVSKESTL VDGNPVCSSS SNPQYLPEGA DLTLVTSYSV 240
  241 SWKYSDTPWA TRWDKYMHIE SRQIRWIFII HSAIIDTFLI FVVSIILYRT LNRDINKYNS 300
  301 AFVDQEDVQE DFGWKLVHGD VFRPPRRPML FSILLGTGAQ LLFMSSGIVL FAIFGIVAPS 360
  361 RRGSLATATV ALFIISGFVS GYVSALSYKL MQGMLRKRNL LLTPFVVPGF MLAAALFFNM 420
  421 VFWSKSSSST VPFSSWLLLI FLYLLFTVPL SFVGSLIGFR SREFVPPVRT NQIPRQIPSH 480
  481 SIWLSSFPSA IIGGSIPFLV ILIELFSILD SLWFHPLYFM FGFSFFCFGI LVTTCIMVSI 540
  541 ITVYFQLCSE NYNWWWRSFI TPGFCGIYVF IFSVFYWFFK ISSSSLATAV LYFGYSLLIS 600
  601 VLVFFLCGSV GFFGAFLFVN KIYASIKID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] MSA 3.091996 View MSA. No confident structure predictions are available.
    2 View Details [86..212] MSA 1.108989 View MSA. No confident structure predictions are available.
    3 View Details [213..302] MSA 1.109981 View MSA. No confident structure predictions are available.
    4 View Details [303..355] deduced N/A No confident structure predictions are available.
    5 View Details [356..499] MSA 2.111971 View MSA. No confident structure predictions are available.
    6 View Details [500..629] MSA 6.109979 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle