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Protein Overview: SPCC364.04c

General Information:
Name(s) found: SPCC364.04c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • CASP family protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 633 amino acids

    Gene Ontology:
    Cellular Component: integral to Golgi membrane [IEA]
    integral to membrane [IEA]
    Golgi membrane [ISSLink to PubMed article]
    Biological Process: intra-Golgi vesicle-mediated transport [IEA]
    Golgi vesicle transport [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVASEALLQ KLTESWKNSR FEELQREADE AAAEIEKMQK TSLDERKELS SKTKEFRKQP  60
   61 DEVKLGEMKG LLKLYQSGID SLTKRAKSAE ATFFRVYETL GEVPDPYPLL IEAANNLKTQ 120
  121 KQIEDLKKEK EEMEGSLQGK EKLEREVENL RKELDKYKDL VETEAEKRAA ITKEECEKSW 180
  181 LEQQKLYKDM EQENASTIQK LTSKIRELQA SQLDHDLQAS QNESAGLDVN AKSAEVNAIL 240
  241 SELDDANKII VELQAEIAVL KQNTKEQKSG SSQDDLSNQQ KQQLDFMDSL NKKLSTELES 300
  301 IKEASRKEME THCATIQTLE NEVKEARKVK EESLTLANKF SDYDEIKREL SVLKQIEFSG 360
  361 EHATHENTSL ESQLLKREKQ LSEELAKLRS TNAQLTDRIT QESKKASFLE QKASEQEEVI 420
  421 RKLEKDLADV DVEGSVYLSN TTYRREGTSG QLSPTSSIMG GNPSLFNGSV LSRNSVNETG 480
  481 SAIVDVIKQQ RDRFRRANVT LVNQVSAAND KIALLESKLE EVEKSNTLLY EQMRFRDHYQ 540
  541 KHVEPSSSHL QTAAAYENSI SPFASFRKKE AERAYSRMGS FERIVYALLR TLLFSRATRG 600
  601 LFFMYLILLH LFIMIVLLKL GIAGNTAYTP MNY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] PSI-BLAST 4.39794 No description for 2iw5A was found.
    2 View Details [165..229] PSI-BLAST 4.045757 No description for 2dfsA was found.
    3 View Details [230..633] PSI-BLAST 13.221849 Heavy meromyosin subfragment

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.1482488389343 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.52430308236637 bayes_pls_golite062009
  • DNA binding
    		•  1.39371716002532 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.35381162416745 bayes_pls_golite062009
  • protein binding
    		•  1.22882921303563 bayes_pls_golite062009
  • transcription factor activity
    		•  0.826255878950115 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle