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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC364.04c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVASEALLQ KLTESWKNSR FEELQREADE AAAEIEKMQK TSLDERKELS SKTKEFRKQP  60
   61 DEVKLGEMKG LLKLYQSGID SLTKRAKSAE ATFFRVYETL GEVPDPYPLL IEAANNLKTQ 120
  121 KQIEDLKKEK EEMEGSLQGK EKLEREVENL RKELDKYKDL VETEAEKRAA ITKEECEKSW 180
  181 LEQQKLYKDM EQENASTIQK LTSKIRELQA SQLDHDLQAS QNESAGLDVN AKSAEVNAIL 240
  241 SELDDANKII VELQAEIAVL KQNTKEQKSG SSQDDLSNQQ KQQLDFMDSL NKKLSTELES 300
  301 IKEASRKEME THCATIQTLE NEVKEARKVK EESLTLANKF SDYDEIKREL SVLKQIEFSG 360
  361 EHATHENTSL ESQLLKREKQ LSEELAKLRS TNAQLTDRIT QESKKASFLE QKASEQEEVI 420
  421 RKLEKDLADV DVEGSVYLSN TTYRREGTSG QLSPTSSIMG GNPSLFNGSV LSRNSVNETG 480
  481 SAIVDVIKQQ RDRFRRANVT LVNQVSAAND KIALLESKLE EVEKSNTLLY EQMRFRDHYQ 540
  541 KHVEPSSSHL QTAAAYENSI SPFASFRKKE AERAYSRMGS FERIVYALLR TLLFSRATRG 600
  601 LFFMYLILLH LFIMIVLLKL GIAGNTAYTP MNY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle