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Protein Overview: SPBC1711.11

General Information:
Name(s) found: SPBC1711.11 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • autophagy associated protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cell division site [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    pre-autophagosomal structure [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    autophagic vacuole [ISSLink to PubMed article]
    Biological Process: piecemeal microautophagy of nucleus [ISS]
    cellular response to stress [IEPLink to PubMed article]
    early endosome to Golgi transport [ISS]
    protein targeting to vacuole [ISSLink to PubMed article]
    CVT pathway [ISS]
    Molecular Function: phosphatidylinositol-3-phosphate binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKCTIKNEQ IETLRSGDTF VSYEIETESD LPVFEDKKFS VRRRYKDFEM LHNILSHDYN  60
   61 GYAIPPLPRK YTVSSFSGGS LSPIFIARRM QSLQTFLDRC STHPVISNSM HMYQFLENNS 120
  121 WKSYYHNAWM QSENTKSKGN NVSGGIESSI QNLDPYAQSL YETAKQLLQN ADTDLSKLEK 180
  181 TCVQYMNSVQ NFPTDIPVPS NLSISNLDVV SVEFKRLKRN SIFLINSFHS KVITSIQDLE 240
  241 DYMVVFKSLI KSREQKVKQF EHFQQIVQSN SNNPDQSSRS DPNFVEATPV VQQTPELKPS 300
  301 PNTTIRTSSL FSIPKFFKKK RYSLGQDDAN PMELLQLSFQ ELCIFNEKLE QELNFLRERI 360
  361 DVEMRKTLQM VCDCHVEYFS GILEQHAVKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] PSI-BLAST 24.0 Solution structure of PX domain from human SNX12
    2 View Details [136..390] FFAS03 2.01 No description for 2ficA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle