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Protein Overview: SPCC965.13

General Information:
Name(s) found: SPCC965.13 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • membrane transporter [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [ISSLink to PubMed article]
    cell division site [IDALink to PubMed article]
    cell tip [IDALink to PubMed article]
    endoplasmic reticulum [IDALink to PubMed article]
    Golgi apparatus [IDALink to PubMed article]
    plasma membrane [ISSLink to PubMed article]
    Biological Process: pyridoxine transport [ISSLink to PubMed article]
    pyridoxamine transport [ISSLink to PubMed article]
    transmembrane transport [IEA]
    pyridoxal transport [ISSLink to PubMed article]
    Molecular Function: pyridoxamine transmembrane transporter activity [ISSLink to PubMed article]
    pyridoxine transmembrane transporter activity [ISSLink to PubMed article]
    pyridoxal transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSILNVIRSH HDVEPQNVEE EPPLTGQTIV TEDKLETSAK DKKHESPSMS EDEEGSVENV  60
   61 DAWDLTKALM SIDPNHPAHP HKWPLWKKLF VATVYTFLEV YVIWSSTACI NFFDIYQTNW 120
  121 HCSIQVSYLV QSLFIVGNAF GPMLLGPMSD IFGRKWVYVG SLILYIIFQI PQALAYNLPM 180
  181 MAINSAIAGA FGSSALANVA SSMCDIFTPE TVGFGISLFV WGANAGASIG SPIGEALYDH 240
  241 WRWFYWMNMI VGGFFVILCV LCPETLPVIN IMNYSSTTGE KTVQVSTLAK AKSAVVRTKF 300
  301 VLSTAFKLLC TEPIIMALGL YNGFAYGLIF LYLDGLFPVF VDNYKMGYMG ANLTYLNFLV 360
  361 GVTIVVMLQP IQNWLYRWDK RRHGGVARPE ARFLISLLTV WFFPAGLFWF AFTSDGRISW 420
  421 VSPLIAGGVL GVGDPQLWLA MINYITDSYP SVAGSAIAAF TLPSFAIAAV LVHLGIIMFD 480
  481 NMTTTWAMAT LAFISLSLVA TIYVIYFFGH LIRKHSRLAV TQQALQEAHD AKVLPEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..537] PSI-BLAST 31.522879 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.24937104052238 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • binding
    		•  1.01584233411372 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle