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Protein Overview: SPAC343.06c

General Information:
Name(s) found: SPAC343.06c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • scramblase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 381 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    Biological Process: phospholipid scrambling [ISS]
    cellular response to stress [IEPLink to PubMed article]
    phospholipid transport [IC]
    Molecular Function: phospholipid scramblase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEILWANIT PIQTFVSSNH LTMLYGLKRF GCRLYHHSKS TRYIDATAKV VSQEPAAISS  60
   61 TGAIPLNSPA APLLSQDVLI VERQLEMMNV FLGYEQANRY VILNQQGQHL GYIAEQGASS 120
  121 ILSSLSRQFF HTHRAFKADV MDSNGQLVLQ LNRPFSWINS RLQIHSIDYS KFSSTLVGEV 180
  181 LQKWHLWRRR YELFLAKRSM FEQFAKIDER VLSWEFLLRN EQDRILGSVS RNFMGLPREF 240
  241 FTDTGNYVLR FTSTSAANGS VNENQLLQAA HGIANDVCAR DMSLEERAVM LGSAVTIDFD 300
  301 YFSRIHGGPA LGLNIPFMFG GSSSNHDYPA EDLSAQEILK NDQETTPSTN DSSSETKSPF 360
  361 LSDADLDQQD FWDIFDRDGD D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..304] FFAS03 1.88 X-ray structure of protein from arabidopsis thaliana AT5G01750
    2 View Details [305..381] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.26911599886926 bayes_pls_golite062009
  • protein binding
    		•  0.6155304260359 bayes_pls_golite062009
  • receptor activity
    		•  0.282498618245369 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.253740491669625 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle