| Protein: | SPAC343.06c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 381 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC343.06c.
| Description | E-value | Query Range |
Subject Range |
|
|
348.0 | [0..1] | [306..38] |
|
|
315.0 | [0..43] | [306..83] |
|
|
312.0 | [0..43] | [307..48] |
|
|
312.0 | [0..15] | [322..31] |
|
|
310.0 | [0..44] | [306..83] |
|
Region A: Residues: [1-304] |
1 11 21 31 41 51
| | | | | |
1 MLEILWANIT PIQTFVSSNH LTMLYGLKRF GCRLYHHSKS TRYIDATAKV VSQEPAAISS 60
61 TGAIPLNSPA APLLSQDVLI VERQLEMMNV FLGYEQANRY VILNQQGQHL GYIAEQGASS 120
121 ILSSLSRQFF HTHRAFKADV MDSNGQLVLQ LNRPFSWINS RLQIHSIDYS KFSSTLVGEV 180
181 LQKWHLWRRR YELFLAKRSM FEQFAKIDER VLSWEFLLRN EQDRILGSVS RNFMGLPREF 240
241 FTDTGNYVLR FTSTSAANGS VNENQLLQAA HGIANDVCAR DMSLEERAVM LGSAVTIDFD 300
301 YFSR
|
| Detection Method: |  |
| Confidence: | 1.88 |
| Match: | 1zxuA |
| Description: | X-ray structure of protein from arabidopsis thaliana AT5G01750 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.26911599886926 | bayes_pls_golite062009 |
| protein binding | 0.6155304260359 | bayes_pls_golite062009 |
| receptor activity | 0.282498618245369 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.253740491669625 | bayes_pls_golite062009 |
|
Region A: Residues: [305-381] |
1 11 21 31 41 51
| | | | | |
1 IHGGPALGLN IPFMFGGSSS NHDYPAEDLS AQEILKNDQE TTPSTNDSSS ETKSPFLSDA 60
61 DLDQQDFWDI FDRDGDD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
