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Protein Overview: SPAC30C2.04

General Information:
Name(s) found: SPAC30C2.04 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • cofactor for methionyl-and glutamyl-tRNA synthetases [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 450 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISSLink to PubMed article]
    methionyl glutamyl tRNA synthetase complex [ISSLink to PubMed article]
    Biological Process: tRNA aminoacylation for protein translation [ISSLink to PubMed article]
    Molecular Function: DNA binding [IEA]
    tRNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLWAKEFC VLKYPYKLFI THKFSYLLRF ETVTLNNIRS PQFYAKLTFS HHQPTVSGTM  60
   61 STELKFISKY LQISIPETKE GPVSSLFKAV SEQKPELLGN TDFEKAQILE WTTKAFSPIE 120
  121 TQSIVEQLDE FLKSSTFIAQ DSGISVADLA VYARIHSYIC GLSAKEGYKL NNVCRWFDFI 180
  181 QHQESVMEAA NSMSMKLANI DLNAPKIQRP SVIKKDKKEK KEGKPSQEAS VKSVEKAPKG 240
  241 LEGAKKEKQN KKEKKDKKDK KDKKEKAPKE PPKAATPVPS MIDFRIGFIE KAVKHPNADS 300
  301 LYVSTIHCGD AEGPRTVCSG LVKYIPLEQM QQRKVIVVAN LKPVNMRSVK SQAMVFCASS 360
  361 PDKSVVEFVL PPENAEIGDR LTFEGFDTEE PEAQLNPKRK IWEAIQPGFT SGEDLICGYK 420
  421 DESGLHRLFV KGKKDLGFCK AQTVVNGTLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..383] PSI-BLAST 37.30103 Methionyl-tRNA synthetase from Pyrococcus abyssi
    2 View Details [384..450] PSI-BLAST 48.30103 EMAP II

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming carbon-oxygen bonds
    		•  7.22739538544605 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  7.22739538544605 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  7.21678612388154 bayes_pls_golite062009
  • ligase activity
    		•  5.98606099120849 bayes_pls_golite062009
  • isoleucine-tRNA ligase activity
    		•  3.76808520367507 bayes_pls_golite062009
  • catalytic activity
    		•  1.41356903593784 bayes_pls_golite062009
  • arginine-tRNA ligase activity
    		•  1.15514226827836 bayes_pls_golite062009
  • binding
    		•  1.12496911405027 bayes_pls_golite062009
  • protein binding
    		•  0.341429946042706 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle